RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 ZNF148Q9UQR1 794 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 NAALAD2Q9Y3Q0 740 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 HRH3Q9Y5N1 445 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 FN1P02751 2386 aaKnown RBP5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 A0A1B0GTH9 108 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ASPDHA6ND91 283 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ERI2A8K979 691 aaKnown RBP5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 FAM166BA8MTA8 275 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 A8MUA0 341 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 E5RI56 91 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 E7ENX8 843 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 F8W8V4 182 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 GOLGA8MH3BSY2 632 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TFECO14948 347 aaPredicted RBP5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 NDUFS4O43181 175 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 HS6ST1O60243 411 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 NME2P1O60361 137 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 B4GALT2O60909 372 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PDE9AO76083 593 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CATP04040 527 aaKnown RBP5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SERPIND1P05546 499 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TPOP07202 933 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CHRM3P20309 590 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 NME2P22392 152 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 RPS3P23396 243 aaKnown RBP eCLIP5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TPP2P29144 1249 aaPredicted RBP5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PPP2R1BP30154 601 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 FDFT1P37268 417 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CCNFP41002 786 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 HNF4AP41235 474 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SLC1A2P43004 574 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 AVPR1BP47901 424 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 KCNJ1P48048 391 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CLCN7P51798 805 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ZNF75DP51815 510 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SMSP52788 366 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ART1P52961 327 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ITGA8P53708 1063 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 RHAGQ02094 409 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TAP2Q03519 686 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 USP10Q14694 798 aaKnown RBP5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SIX1Q15475 284 aaPredicted RBP5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 NSDHLQ15738 373 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 DEFB134Q4QY38 66 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ANKRD20A4Q4UJ75 823 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PCID2Q5JVF3 399 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SEL1L2Q5TEA6 688 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TMEM214Q6NUQ4 689 aaKnown RBP5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MTFR2Q6P444 385 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CASC4Q6P4E1 433 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ZNF549Q6P9A3 640 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CENPUQ71F23 418 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ZNF227Q86WZ6 799 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 DOLPP1Q86YN1 238 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TMEM139Q8IV31 216 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 LRRC56Q8IYG6 542 aaPredicted RBP5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CYP4X1Q8N118 509 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PRELID2Q8N945 189 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CA5BP1Q8WTZ4 195 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ZNF669Q96BR6 464 aaPredicted RBP5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MVB12AQ96EY5 273 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SCMH1Q96GD3 660 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 DMRTA2Q96SC8 542 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CYTH2Q99418 400 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 GPR21Q99679 349 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TGIF2Q9GZN2 237 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ATG10Q9H0Y0 220 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SPNS1Q9H2V7 528 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 RHBGQ9H310 441 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MCCC2Q9HCC0 563 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CCDC177Q9NQR7 707 aaPredicted RBP5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 FAM114A2Q9NRY5 505 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 LANCL2Q9NS86 450 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TRMT1Q9NXH9 659 aaKnown RBP5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 LRFN1Q9P244 771 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TEKT2Q9UIF3 430 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CDC14AQ9UNH5 594 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ZNF835Q9Y2P0 537 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ASB1Q9Y576 335 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 LIPGQ9Y5X9 500 aa5.63□□□□□ -1.51
HLA-DPA3-207ENST00000454398 FBN3Q75N90 2809 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 A0A0G2JN53 185 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MYOCOSA0A1B0GUC4 107 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PINLYPA6NC86 204 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MIF4GDA9UHW6 222 aaKnown RBP5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 NDC80O14777 642 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PSMD3O43242 534 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ASNA1O43681 348 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 KIF5CO60282 957 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 BANF1O75531 89 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CCNDBP1O95273 360 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 FKBP9O95302 570 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 NSA2O95478 260 aaKnown RBP5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TSPAN12O95859 305 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ESR1P03372 595 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ZNF888P0CJ79 500 aaPredicted RBP5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PKMP14618 531 aaKnown RBP5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CD46P15529 392 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ATP5DP30049 168 aa5.62□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PPARGP37231 505 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms