RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 LAYNQ6UX15 382 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 LRRC70Q7Z2Q7 622 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 TAF8Q7Z7C8 310 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 ADGRG5Q8IZF4 528 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 CENPSQ8N2Z9 138 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 OR13F1Q8NGS4 319 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 RAB2BQ8WUD1 216 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 FERD3LQ96RJ6 166 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 INSM2Q96T92 566 aaPredicted RBP15.28■□□□□ 0.04
SNX17-204ENST00000453453 PKP4Q99569 1192 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 MVB12BQ9H7P6 319 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 POLR1BQ9H9Y6 1135 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 PRDM8Q9NQV8 689 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 ACSS2Q9NR19 701 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 SMPD3Q9NY59 655 aaPredicted RBP15.28■□□□□ 0.04
SNX17-204ENST00000453453 PCOLCE2Q9UKZ9 415 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 PNMA8BQ9ULN7 279 aaPredicted RBP15.28■□□□□ 0.04
SNX17-204ENST00000453453 CDC14AQ9UNH5 594 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 TDRKHQ9Y2W6 561 aaKnown RBP15.28■□□□□ 0.04
SNX17-204ENST00000453453 LRRC14BA6NHZ5 514 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 TMEM233B4DJY2 109 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 BOLA2-SMG1P6H3BVE0 249 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 K7EPI3 171 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 TAPBPO15533 448 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 VPS4BO75351 444 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 ZBTB11O95625 1053 aaPredicted RBP15.28■□□□□ 0.04
SNX17-204ENST00000453453 CSF2P04141 144 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 NME1P15531 152 aaKnown RBP15.28■□□□□ 0.04
SNX17-204ENST00000453453 CCNA2P20248 432 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 GPX3P22352 226 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 NDUFS1P28331 727 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 HSD17B2P37059 387 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 CSNK1EP49674 416 aaKnown RBP15.28■□□□□ 0.04
SNX17-204ENST00000453453 GRIK2Q13002 908 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 ELOCQ15369 112 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 TCEA2Q15560 299 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 RGS21Q2M5E4 152 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 CCDC92Q53HC0 331 aaPredicted RBP15.28■□□□□ 0.04
SNX17-204ENST00000453453 ZNF542PQ5EBM4 170 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 FBXO48Q5FWF7 155 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 CYP2R1Q6VVX0 501 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 PTRH1Q86Y79 214 aaKnown RBP15.28■□□□□ 0.04
SNX17-204ENST00000453453 OR5AR1Q8NGP9 310 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 NELL1Q92832 810 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 BCL7BQ9BQE9 202 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 HGH1Q9BTY7 390 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 PFDN4Q9NQP4 134 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 CCDC167Q9P0B6 97 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 STOX2Q9P2F5 926 aaPredicted RBP15.28■□□□□ 0.04
SNX17-204ENST00000453453 TBC1D29Q9UFV1 150 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 ERGIC3Q9Y282 383 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 CFAP20Q9Y6A4 193 aaKnown RBP15.28■□□□□ 0.04
SNX17-204ENST00000453453 COLEC10Q9Y6Z7 277 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 KMT2EQ8IZD2 1858 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 SAC3D1A6NKF1 404 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 KPNA4O00629 521 aaPredicted RBP15.27■□□□□ 0.03
SNX17-204ENST00000453453 E2F3O00716 465 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 HRO43593 1189 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 KATNA1O75449 491 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 SEC14L2O76054 403 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 SP9P0CG40 484 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 MTHFD1P11586 935 aaKnown RBP15.27■□□□□ 0.03
SNX17-204ENST00000453453 F3P13726 295 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 EPB42P16452 691 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 CDH3P22223 829 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 ARL1P40616 181 aaPredicted RBP15.27■□□□□ 0.03
SNX17-204ENST00000453453 CDH13P55290 713 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 RPS3AP61247 264 aaKnown RBP15.27■□□□□ 0.03
SNX17-204ENST00000453453 HNRNPKP61978 463 aaKnown RBP eCLIP15.27■□□□□ 0.03
SNX17-204ENST00000453453 ADARB1P78563 741 aaKnown RBP15.27■□□□□ 0.03
SNX17-204ENST00000453453 NFATC3Q12968 1075 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 PMS2P3Q13401 168 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 GTF2H2Q13888 395 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 CLCA4Q14CN2 919 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 ANGPT1Q15389 498 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 RPE65Q16518 533 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 C18orf21Q32NC0 220 aaPredicted RBP15.27■□□□□ 0.03
SNX17-204ENST00000453453 AASDHQ4L235 1098 aaPredicted RBP15.27■□□□□ 0.03
SNX17-204ENST00000453453 PRRT3Q5FWE3 981 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 GTF2H2CQ6P1K8 395 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 C16orf87Q6PH81 154 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 AGTRAPQ6RW13 159 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 RABEPKQ7Z6M1 372 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 GKN2Q86XP6 184 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 SYTL1Q8IYJ3 562 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 ESAMQ96AP7 390 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 CXorf40BQ96DE9 158 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 MOCOSQ96EN8 888 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 ZC3H10Q96K80 434 aaKnown RBP15.27■□□□□ 0.03
SNX17-204ENST00000453453 RDH12Q96NR8 316 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 DCUN1D5Q9BTE7 237 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 RAB11FIP5Q9BXF6 653 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 TCEAL2Q9H3H9 227 aaPredicted RBP15.27■□□□□ 0.03
SNX17-204ENST00000453453 SLC32A1Q9H598 525 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 SEMA4BQ9NPR2 832 aaPredicted RBP15.27■□□□□ 0.03
SNX17-204ENST00000453453 RIC8BQ9NVN3 520 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 SPATA7Q9P0W8 599 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 TAAR2Q9P1P5 351 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 SPASTQ9UBP0 616 aa15.27■□□□□ 0.03
SNX17-204ENST00000453453 KLF15Q9UIH9 416 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms