RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 PHACTR1Q9C0D0 580 aa18.36■□□□□ 0.53
USP40-207ENST00000450940 ILKAPQ9H0C8 392 aaPredicted RBP18.36■□□□□ 0.53
USP40-207ENST00000450940 ZNF700Q9H0M5 742 aa18.36■□□□□ 0.53
USP40-207ENST00000450940 DPH5Q9H2P9 285 aa18.36■□□□□ 0.53
USP40-207ENST00000450940 CPAMD8Q8IZJ3 1885 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 TCP11X1B4DZS4 312 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 KLHL18O94889 574 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 GUCA1CO95843 209 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 C1QAP02745 245 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 SERPINA7P05543 415 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 PRR35P0CG20 571 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 SAT1P21673 171 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 SSTR1P30872 391 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 POU4F1Q01851 419 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 MFAP5Q13361 173 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 PWP1Q13610 501 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 ZNF460Q14592 562 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 ISLR2Q6UXK2 745 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 RIPOR1Q6ZS17 1223 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 AFAP1L2Q8N4X5 818 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 NEIL2Q969S2 332 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 IMMP1LQ96LU5 166 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 SLC29A3Q9BZD2 475 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 ANKHQ9HCJ1 492 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 SAYSD1Q9NPB0 183 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 MKL2Q9ULH7 1088 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 OARD1Q9Y530 152 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 CSAG2Q9Y5P2 127 aa18.35■□□□□ 0.53
USP40-207ENST00000450940 CXorf49A8MYA2 514 aaPredicted RBP18.34■□□□□ 0.53
USP40-207ENST00000450940 GSTA2P09210 222 aa18.34■□□□□ 0.53
USP40-207ENST00000450940 SLC35G6P0C7Q6 338 aa18.34■□□□□ 0.53
USP40-207ENST00000450940 IL1RNP18510 177 aa18.34■□□□□ 0.53
USP40-207ENST00000450940 SOX11P35716 441 aa18.34■□□□□ 0.53
USP40-207ENST00000450940 CAV1Q03135 178 aa18.34■□□□□ 0.53
USP40-207ENST00000450940 C2orf54Q08AI8 447 aa18.34■□□□□ 0.53
USP40-207ENST00000450940 PCOLCEQ15113 449 aa18.34■□□□□ 0.53
USP40-207ENST00000450940 CATSPEREQ5SY80 951 aa18.34■□□□□ 0.53
USP40-207ENST00000450940 THOC6Q86W42 341 aaKnown RBP18.34■□□□□ 0.53
USP40-207ENST00000450940 PDSS2Q86YH6 399 aa18.34■□□□□ 0.53
USP40-207ENST00000450940 KLHDC8AQ8IYD2 350 aa18.34■□□□□ 0.53
USP40-207ENST00000450940 SHISA5Q8N114 240 aa18.34■□□□□ 0.53
USP40-207ENST00000450940 C17orf53Q8N3J3 647 aaPredicted RBP18.34■□□□□ 0.53
USP40-207ENST00000450940 CISD2Q8N5K1 135 aaKnown RBP18.34■□□□□ 0.53
USP40-207ENST00000450940 ZNF740Q8NDX6 193 aa18.34■□□□□ 0.53
USP40-207ENST00000450940 OR51Q1Q8NH59 317 aa18.34■□□□□ 0.53
USP40-207ENST00000450940 SLC5A11Q8WWX8 675 aa18.34■□□□□ 0.53
USP40-207ENST00000450940 CYTH2Q99418 400 aa18.34■□□□□ 0.53
USP40-207ENST00000450940 VN1R1Q9GZP7 353 aa18.34■□□□□ 0.53
USP40-207ENST00000450940 EPS8L2Q9H6S3 715 aa18.34■□□□□ 0.53
USP40-207ENST00000450940 PELI2Q9HAT8 420 aa18.34■□□□□ 0.53
USP40-207ENST00000450940 RIC8BQ9NVN3 520 aa18.34■□□□□ 0.53
USP40-207ENST00000450940 ASF1BQ9NVP2 202 aa18.34■□□□□ 0.53
USP40-207ENST00000450940 HIVEP3Q5T1R4 2406 aa18.34■□□□□ 0.53
USP40-207ENST00000450940 TCRBV9S1A1TA0A576 114 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 NPEPPSL1A6NEC2 478 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 FAM159BA6NKW6 160 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 SGK494L7N484 410 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 OR1F1O43749 312 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 JRKO75564 520 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 PIAS1O75925 651 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 ICAM2P13598 275 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 IL10P22301 178 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 AHRP35869 848 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 TSFMP43897 325 aaKnown RBP18.33■□□□□ 0.52
USP40-207ENST00000450940 SCTRP47872 440 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 HNMTP50135 292 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 MEF2AQ02078 507 aaPredicted RBP18.33■□□□□ 0.52
USP40-207ENST00000450940 EEF1A2Q05639 463 aaKnown RBP18.33■□□□□ 0.52
USP40-207ENST00000450940 CSHL1Q14406 222 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 HERC3Q15034 1050 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 B3GNTL1Q67FW5 361 aaPredicted RBP18.33■□□□□ 0.52
USP40-207ENST00000450940 FAAH2Q6GMR7 532 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 SYT10Q6XYQ8 523 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 ADAMTSL2Q86TH1 951 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 TBC1D19Q8N5T2 526 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 DNAJB14Q8TBM8 379 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 NT5CQ8TCD5 201 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 CDKL2Q92772 493 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 MOCOSQ96EN8 888 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 CPNE1Q99829 537 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 TUBB6Q9BUF5 446 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 DERL2Q9GZP9 239 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 SPNS1Q9H2V7 528 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 GPAMQ9HCL2 828 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 CTNNAL1Q9UBT7 734 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 ZFP69BQ9UJL9 534 aa18.33■□□□□ 0.52
USP40-207ENST00000450940 MTO1Q9Y2Z2 717 aaKnown RBP18.33■□□□□ 0.52
USP40-207ENST00000450940 COPG1Q9Y678 874 aaKnown RBP18.33■□□□□ 0.52
USP40-207ENST00000450940 UTP20O75691 2785 aaKnown RBP18.32■□□□□ 0.52
USP40-207ENST00000450940 CBX6O95503 412 aa18.32■□□□□ 0.52
USP40-207ENST00000450940 C8orf89P0DMQ9 161 aa18.32■□□□□ 0.52
USP40-207ENST00000450940 XCR1P46094 333 aa18.32■□□□□ 0.52
USP40-207ENST00000450940 GPX6P59796 221 aa18.32■□□□□ 0.52
USP40-207ENST00000450940 AP2B1P63010 937 aa18.32■□□□□ 0.52
USP40-207ENST00000450940 REEP5Q00765 189 aa18.32■□□□□ 0.52
USP40-207ENST00000450940 TSNQ15631 228 aaKnown RBP18.32■□□□□ 0.52
USP40-207ENST00000450940 NXPE4Q6UWF7 544 aa18.32■□□□□ 0.52
USP40-207ENST00000450940 CAPN12Q6ZSI9 719 aa18.32■□□□□ 0.52
USP40-207ENST00000450940 C3orf62Q6ZUJ4 267 aa18.32■□□□□ 0.52
USP40-207ENST00000450940 ZCCHC10Q8TBK6 192 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms