RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 EIF3MQ7L2H7 374 aaKnown RBP8.34□□□□□ -1.07
LSM5-208ENST00000450169 CHMP1BQ7LBR1 199 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 JAZF1Q86VZ6 243 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 SLC44A2Q8IWA5 706 aaPredicted RBP8.34□□□□□ -1.07
LSM5-208ENST00000450169 LRRC17Q8N6Y2 441 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 CLRN3Q8NCR9 226 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 ATP6V1C2Q8NEY4 427 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 SPATA22Q8NHS9 363 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 CDC26Q8NHZ8 85 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 C9orf43Q8TAL5 461 aaPredicted RBP8.34□□□□□ -1.07
LSM5-208ENST00000450169 SLC13A3Q8WWT9 602 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 YIPF5Q969M3 257 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 MTERF3Q96E29 417 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 WBP1Q96G27 269 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 P2RY13Q9BPV8 354 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 PELOQ9BRX2 385 aaKnown RBP8.34□□□□□ -1.07
LSM5-208ENST00000450169 TAPBPLQ9BX59 468 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 C1QTNF6Q9BXI9 259 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 CD244Q9BZW8 370 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 COA1Q9GZY4 146 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 GHITMQ9H3K2 345 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 ACTL8Q9H568 366 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 JPH1Q9HDC5 661 aaPredicted RBP8.34□□□□□ -1.07
LSM5-208ENST00000450169 RAD18Q9NS91 495 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 CATSPERZQ9NTU4 200 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 PRMT7Q9NVM4 692 aaPredicted RBP8.34□□□□□ -1.07
LSM5-208ENST00000450169 SDHAF2Q9NX18 166 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 PTTG3PQ9NZH4 202 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 SAMHD1Q9Y3Z3 626 aaKnown RBP8.34□□□□□ -1.07
LSM5-208ENST00000450169 MAB21L2Q9Y586 359 aa8.34□□□□□ -1.07
LSM5-208ENST00000450169 ZNF638Q14966 1978 aaKnown RBP8.34□□□□□ -1.07
LSM5-208ENST00000450169 SYNJ2BP-COX16A0A087WUM0 186 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 A0A0B4J203 849 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 SLC22A23A1A5C7 686 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 MFSD2BA6NFX1 497 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 YDJCA8MPS7 323 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 KRBOX1C9JBD0 128 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 ZNF670-ZNF695F2Z2N8 137 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 F8W810 466 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 INMT-MINDY4F8WBC2 141 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 ARVCFO00192 962 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 DIRAS1O95057 198 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 ZNF682O95780 498 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 JCHAINP01591 159 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 CYP17A1P05093 508 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 S100A6P06703 90 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 UROSP10746 265 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 G6PDP11413 515 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 ERCC2P18074 760 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 PTPRAP18433 802 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 GGT2P36268 569 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 MAN2A2P49641 1150 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 CLCN4P51793 760 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 EFNA5P52803 228 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 SP2Q02086 613 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 HSF2Q03933 536 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 RIPPLY1Q0D2K3 151 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 MADCAM1Q13477 382 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 FCN2Q15485 313 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 OR4D1Q15615 310 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 ZNF284Q2VY69 593 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 ZNF648Q5T619 568 aaPredicted RBP8.33□□□□□ -1.08
LSM5-208ENST00000450169 DDI2Q5TDH0 399 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 RGMBQ6NW40 437 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 FAHD1Q6P587 224 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 FIP1L1Q6UN15 594 aaKnown RBP8.33□□□□□ -1.08
LSM5-208ENST00000450169 Q6ZPB1 254 aaPredicted RBP8.33□□□□□ -1.08
LSM5-208ENST00000450169 RRM2BQ7LG56 351 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 OVCH2Q7RTZ1 564 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 ADGRD2Q7Z7M1 963 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 ZNF605Q86T29 641 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 FAM217AQ8IXS0 508 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 SLC34A3Q8N130 599 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 NPWQ8N729 165 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 IPMKQ8NFU5 416 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 OR11H4Q8NGC9 324 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 OR6C4Q8NGE1 309 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 CREB3L4Q8TEY5 395 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 ZDHHC15Q96MV8 337 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 NPAS1Q99742 590 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 MRPL45Q9BRJ2 306 aaKnown RBP8.33□□□□□ -1.08
LSM5-208ENST00000450169 GABARAPL3Q9BY60 117 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 DBNDD1Q9H9R9 158 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 FOLH1BQ9HBA9 442 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 BRD7Q9NPI1 651 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 PXMP2Q9NR77 195 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 HEBP1Q9NRV9 189 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 SIRT5Q9NXA8 310 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 KCMF1Q9P0J7 381 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 COX16Q9P0S2 106 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 FEM1BQ9UK73 627 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 AAR2Q9Y312 384 aaKnown RBP8.33□□□□□ -1.08
LSM5-208ENST00000450169 DOCK5Q9H7D0 1870 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 A0A0A6YYJ9 748 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 LOC102723532A0A0G2JNH3 316 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 PIPSLA2A3N6 862 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 A6NJY4 79 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 FAM220BPB1ANY3 271 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 HNRNPCL2B2RXH8 293 aa8.33□□□□□ -1.08
LSM5-208ENST00000450169 GFRA2O00451 464 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms