RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 DPH7Q9BTV6 452 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 LRRC61Q9BV99 259 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 SARGQ9BW04 601 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 MS4A8Q9BY19 250 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 MIR1-1HGQ9H1L0 117 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 NANOGQ9H9S0 305 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 CD320Q9NPF0 282 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 AHSPQ9NZD4 102 aa13.67□□□□□ -0.22
USP39-207ENST00000450066 STX18Q9P2W9 335 aaKnown RBP13.67□□□□□ -0.22
USP39-207ENST00000450066 ISM1B1AKI9 464 aa13.66□□□□□ -0.22
USP39-207ENST00000450066 SAP18O00422 153 aaKnown RBP13.66□□□□□ -0.22
USP39-207ENST00000450066 BTN3A3O00478 584 aa13.66□□□□□ -0.22
USP39-207ENST00000450066 GSTM2P28161 218 aa13.66□□□□□ -0.22
USP39-207ENST00000450066 HOXA6P31267 233 aa13.66□□□□□ -0.22
USP39-207ENST00000450066 PHC1P78364 1004 aa13.66□□□□□ -0.22
USP39-207ENST00000450066 ZNF763Q0D2J5 394 aa13.66□□□□□ -0.22
USP39-207ENST00000450066 TRAP1Q12931 704 aaKnown RBP13.66□□□□□ -0.22
USP39-207ENST00000450066 PGS1Q32NB8 556 aa13.66□□□□□ -0.22
USP39-207ENST00000450066 SLC9B2Q86UD5 537 aa13.66□□□□□ -0.22
USP39-207ENST00000450066 GPR180Q86V85 440 aa13.66□□□□□ -0.22
USP39-207ENST00000450066 NAGSQ8N159 534 aa13.66□□□□□ -0.22
USP39-207ENST00000450066 FBXL6Q8N531 539 aa13.66□□□□□ -0.22
USP39-207ENST00000450066 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.66□□□□□ -0.22
USP39-207ENST00000450066 PATE1Q8WXA2 126 aa13.66□□□□□ -0.22
USP39-207ENST00000450066 GFM2Q969S9 779 aaKnown RBP13.66□□□□□ -0.22
USP39-207ENST00000450066 CGREF1Q99674 301 aa13.66□□□□□ -0.22
USP39-207ENST00000450066 RMND5AQ9H871 391 aa13.66□□□□□ -0.22
USP39-207ENST00000450066 SNX7Q9UNH6 387 aa13.66□□□□□ -0.22
USP39-207ENST00000450066 MAN2B2Q9Y2E5 1009 aa13.66□□□□□ -0.22
USP39-207ENST00000450066 L3MBTL1Q9Y468 752 aa13.66□□□□□ -0.22
USP39-207ENST00000450066 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 AKAP10O43572 662 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 LCMT2O60294 686 aaKnown RBP13.65□□□□□ -0.22
USP39-207ENST00000450066 CLEC3AO75596 197 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 BCKDHBP21953 392 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 KIR3DL1P43629 444 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 ERFP50548 548 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 AP2B1P63010 937 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 CYP4F2P78329 520 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 C1orf61Q13536 156 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 ELOCQ15369 112 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 UGT8Q16880 541 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 RABL3Q5HYI8 236 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 C6orf10Q5SRN2 563 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 KIAA1614Q5VZ46 1190 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 ZNF425Q6IV72 752 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 FAM20CQ8IXL6 584 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 TMEFF1Q8IYR6 380 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 TBC1D19Q8N5T2 526 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 FAM46DQ8NEK8 389 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 OR8J2Q8NGG1 315 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 SLC26A7Q8TE54 656 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 SLC37A2Q8TED4 501 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 DNASE2BQ8WZ79 361 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 ITCHQ96J02 903 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 PPM1MQ96MI6 270 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 DUSP15Q9H1R2 295 aaPredicted RBP13.65□□□□□ -0.22
USP39-207ENST00000450066 SERHLQ9NQF3 203 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 MCM8Q9UJA3 840 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 ARHGEF17Q96PE2 2063 aaPredicted RBP13.65□□□□□ -0.22
USP39-207ENST00000450066 GON4LQ3T8J9 2241 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 CCDC163A0A0D9SF12 145 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 FAM221BA6H8Z2 402 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 SCAMP2O15127 329 aaKnown RBP13.65□□□□□ -0.22
USP39-207ENST00000450066 ERN1O75460 977 aaKnown RBP13.65□□□□□ -0.22
USP39-207ENST00000450066 COX7A2P14406 83 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 HPCAL1P37235 193 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 DMWDQ09019 674 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 HKDC1Q2TB90 917 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 CAMKMTQ7Z624 323 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 PLD3Q8IV08 490 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 RBM12BQ8IXT5 1001 aaKnown RBP13.65□□□□□ -0.22
USP39-207ENST00000450066 HIPK4Q8NE63 616 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 OR7A2PQ8NGA2 310 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 OR8J3Q8NGG0 315 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 WDR48Q8TAF3 677 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 CREB3L4Q8TEY5 395 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 PCDHAC1Q9H158 963 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 KCNH6Q9H252 994 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 S100A14Q9HCY8 104 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 PCDHGA2Q9Y5H1 932 aa13.65□□□□□ -0.22
USP39-207ENST00000450066 HEATR5BQ9P2D3 2071 aa13.65□□□□□ -0.23
USP39-207ENST00000450066 PLPP1O14494 284 aa13.64□□□□□ -0.23
USP39-207ENST00000450066 HAT1O14929 419 aa13.64□□□□□ -0.23
USP39-207ENST00000450066 KLK1P06870 262 aa13.64□□□□□ -0.23
USP39-207ENST00000450066 AHRP35869 848 aa13.64□□□□□ -0.23
USP39-207ENST00000450066 HNRNPFP52597 415 aaKnown RBP13.64□□□□□ -0.23
USP39-207ENST00000450066 EEFSECP57772 596 aaKnown RBP13.64□□□□□ -0.23
USP39-207ENST00000450066 NXPH1P58417 271 aa13.64□□□□□ -0.23
USP39-207ENST00000450066 LRIF1Q5T3J3 769 aa13.64□□□□□ -0.23
USP39-207ENST00000450066 CWF19L1Q69YN2 538 aaKnown RBP13.64□□□□□ -0.23
USP39-207ENST00000450066 BHLHE22Q8NFJ8 381 aaPredicted RBP13.64□□□□□ -0.23
USP39-207ENST00000450066 CDC26Q8NHZ8 85 aa13.64□□□□□ -0.23
USP39-207ENST00000450066 FLVCR1-AS1Q8TAF5 88 aa13.64□□□□□ -0.23
USP39-207ENST00000450066 ZDHHC1Q8WTX9 485 aa13.64□□□□□ -0.23
USP39-207ENST00000450066 ANKRD27Q96NW4 1050 aa13.64□□□□□ -0.23
USP39-207ENST00000450066 OR2A14Q96R47 310 aa13.64□□□□□ -0.23
USP39-207ENST00000450066 F2RL3Q96RI0 385 aa13.64□□□□□ -0.23
USP39-207ENST00000450066 PRPF18Q99633 342 aaKnown RBP13.64□□□□□ -0.23
USP39-207ENST00000450066 CENPKQ9BS16 269 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms