RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 CTAGE3PQ8IX95 158 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 RBMXL3Q8N7X1 1067 aaKnown RBP13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 ANKRD53Q8N9V6 530 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 TEX19Q8NA77 164 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 SLC5A11Q8WWX8 675 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 KIAA1191Q96A73 305 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 PELI2Q9HAT8 420 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 MKKSQ9NPJ1 570 aaPredicted RBP13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 GPR83Q9NYM4 423 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 NINJ2Q9NZG7 142 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 C5AR2Q9P296 337 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 C3orf18Q9UK00 162 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 PTBP2Q9UKA9 531 aaKnown RBP13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 ZNF451Q9Y4E5 1061 aa13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 SPTAN1Q13813 2472 aaKnown RBP13.34□□□□□ -0.27
RTFDC1-204ENST00000449062 POLEQ07864 2286 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 LOC102723996A0A087X1L8 192 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 IDSB3KWA1 339 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 KIF2AO00139 706 aaPredicted RBP13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 OR1F1O43749 312 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 DNAJB6O75190 326 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 BMP10O95393 424 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 SMIM10L1P0DMW3 83 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 STX2P32856 288 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 EMP2P54851 167 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 SLC12A2P55011 1212 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 FOXK1P85037 733 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 HYAL2Q12891 473 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 AIMP2Q13155 320 aaKnown RBP13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 CSHL1Q14406 222 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 NDUFA9Q16795 377 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 NADK2Q4G0N4 442 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 TMEM205Q6UW68 189 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 CMC1Q7Z7K0 106 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 HPS6Q86YV9 775 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 PRSS58Q8IYP2 241 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 CLEC1AQ8NC01 280 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 MNS1Q8NEH6 495 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 SMIM10Q96HG1 83 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 CRB3Q9BUF7 120 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 TRIM4Q9C037 500 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 AICDAQ9GZX7 198 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 ZBTB20Q9HC78 741 aaPredicted RBP13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 IGSF5Q9NSI5 407 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 TXNDC16Q9P2K2 825 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 COPG2Q9UBF2 871 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 ZFP69BQ9UJL9 534 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 KCNE2Q9Y6J6 123 aa13.33□□□□□ -0.28
RTFDC1-204ENST00000449062 PRPF4O43172 522 aaKnown RBP eCLIP13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 JRKO75564 520 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 SORBS2O94875 1100 aaKnown RBP13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 CTAGE8P0CG41 777 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 CRABP2P29373 138 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 GRK3P35626 688 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 AHRP35869 848 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 AVPR1BP47901 424 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 CD97P48960 835 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 REEP5Q00765 189 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 RAPSNQ13702 412 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 IGFBP7Q16270 282 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 RBBP7Q16576 425 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 VWA5B1Q5TIE3 1220 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 IGFL2Q6UWQ7 119 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 GPSM1Q86YR5 675 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 CTAGE4Q8IX94 777 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 AMER2Q8N7J2 671 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 Q8NA96 180 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 KIF18AQ8NI77 898 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 NT5CQ8TCD5 201 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 CREB3L4Q8TEY5 395 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 PSMF1Q92530 271 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 C8orf44Q96CB5 159 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 TSNARE1Q96NA8 513 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 TMEM79Q9BSE2 394 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 ACSS3Q9H6R3 686 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 C14orf105Q9NVL8 296 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 SCN3AQ9NY46 2000 aa13.32□□□□□ -0.28
RTFDC1-204ENST00000449062 SGK494L7N484 410 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 ALOX12BO75342 701 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 TBX6O95947 436 aaPredicted RBP13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 C1GALT1C1LP0DN25 315 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 COX6A1P12074 109 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 IL1RNP18510 177 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 EPORP19235 508 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 VARSP26640 1264 aaKnown RBP13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 MLLT10P55197 1068 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 E2F2Q14209 437 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 TUBB8Q3ZCM7 444 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 PLEKHN1Q494U1 663 aaPredicted RBP13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 CRB2Q5IJ48 1285 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 SULT1C3Q6IMI6 304 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 JMJD6Q6NYC1 403 aaPredicted RBP13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 NDUFAF7Q7L592 441 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 PARP9Q8IXQ6 854 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 CENPLQ8N0S6 344 aaPredicted RBP13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 PDPRQ8NCN5 879 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 OR51Q1Q8NH59 317 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 ESAMQ96AP7 390 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 MIB2Q96AX9 1013 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 IMMP1LQ96LU5 166 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms