RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 KRT5P13647 590 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 RFC1P35251 1148 aaPredicted RBP3.03□□□□□ -1.92
PMS1-215ENST00000447232 FMO5P49326 533 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 OC90Q02509 493 aaPredicted RBP3.03□□□□□ -1.92
PMS1-215ENST00000447232 FOXO1Q12778 655 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 TMEM115Q12893 351 aaPredicted RBP3.03□□□□□ -1.92
PMS1-215ENST00000447232 SLC39A14Q15043 492 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 C15orf59Q2T9L4 293 aaPredicted RBP3.03□□□□□ -1.92
PMS1-215ENST00000447232 VASNQ6EMK4 673 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 FIGLAQ6QHK4 219 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 ARHGEF18Q6ZSZ5 1173 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 IL17RELQ6ZVW7 336 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 PLEKHM3Q6ZWE6 761 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 METTL27Q8N6F8 245 aaPredicted RBP3.03□□□□□ -1.92
PMS1-215ENST00000447232 GPR26Q8NDV2 337 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 SEMA6DQ8NFY4 1073 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 TMEM171Q8WVE6 324 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 PEX11GQ96HA9 241 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 MARK4Q96L34 752 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 SPATA32Q96LK8 384 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 RMDN2Q96LZ7 410 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 VPS35Q96QK1 796 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 SMC6Q96SB8 1091 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 ZFYVE21Q9BQ24 234 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 SPATA16Q9BXB7 569 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 ANGPTL4Q9BY76 406 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 ZNF304Q9HCX3 659 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 SPTLC3Q9NUV7 552 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 EXOC1Q9NV70 894 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 IRAK4Q9NWZ3 460 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 C6orf203Q9P0P8 240 aaPredicted RBP3.03□□□□□ -1.92
PMS1-215ENST00000447232 KLF13Q9Y2Y9 288 aaPredicted RBP3.03□□□□□ -1.92
PMS1-215ENST00000447232 TESMINQ9Y4I5 508 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 COLEC10Q9Y6Z7 277 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 RYR1P21817 5038 aa3.03□□□□□ -1.92
PMS1-215ENST00000447232 C1orf232A0A0U1RR37 186 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 C7orf72A4D263 438 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 FAM157AC9JC47 383 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 KLRC4-KLRK1H3BQV0 150 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 CTIFO43310 598 aaKnown RBP3.03□□□□□ -1.93
PMS1-215ENST00000447232 LMX1BO60663 402 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 TMIGD3P0DMS9 266 aaPredicted RBP3.03□□□□□ -1.93
PMS1-215ENST00000447232 GABRA1P14867 456 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 UGT2B7P16662 529 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 PAMP19021 973 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 MCM3P25205 808 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 IDUAP35475 653 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 ZNF136P52737 540 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 AP1B1Q10567 949 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 GRM7Q14831 915 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 TAZQ16635 292 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 BTBD16Q32M84 506 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 SPATS1Q496A3 300 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 CCDC14Q49A88 953 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 FAM120AOSQ5T036 256 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 PRMT9Q6P2P2 845 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 MAATS1Q7Z4T9 603 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 DAAM2Q86T65 1068 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 AMIGO1Q86WK6 493 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 GRAMD1CQ8IYS0 662 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 EMC1Q8N766 993 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 GTPBP4Q9BZE4 634 aaKnown RBP3.03□□□□□ -1.93
PMS1-215ENST00000447232 TGIF2Q9GZN2 237 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 DEFB127Q9H1M4 99 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 C12orf65Q9H3J6 166 aaKnown RBP3.03□□□□□ -1.93
PMS1-215ENST00000447232 SYNCQ9H7C4 482 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 LIPGQ9Y5X9 500 aa3.03□□□□□ -1.93
PMS1-215ENST00000447232 A0A0J9YY10 115 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 OVOL3O00110 214 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 AQP7O14520 342 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 SLC16A3O15427 465 aaKnown RBP3.02□□□□□ -1.93
PMS1-215ENST00000447232 PEX1O43933 1283 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 MT-CYBP00156 380 aaPredicted RBP3.02□□□□□ -1.93
PMS1-215ENST00000447232 CDH5P33151 784 aaPredicted RBP3.02□□□□□ -1.93
PMS1-215ENST00000447232 ACVR1BP36896 505 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 PTPN9P43378 593 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 CYB561P49447 251 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 MAXP61244 160 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 OCRLQ01968 901 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 CDO1Q16878 200 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 ANKRD20A8PQ5CZ79 823 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 ALS2CLQ60I27 953 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 ABHD17CQ6PCB6 329 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 ABHD13Q7L211 337 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 SLFN11Q7Z7L1 901 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 NPWQ8N729 165 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 RASGEF1AQ8N9B8 481 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 TNIP2Q8NFZ5 429 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 OR52E1Q8NGJ3 308 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 OR6P1Q8NGX9 317 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 NTNG2Q96CW9 530 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 C18orf8Q96DM3 657 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 TNFRSF13CQ96RJ3 184 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 PIGQQ9BRB3 760 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 TUBGCP2Q9BSJ2 902 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 CNPPD1Q9BV87 410 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 TDRD1Q9BXT4 1180 aaKnown RBP3.02□□□□□ -1.93
PMS1-215ENST00000447232 SCAND2PQ9GZW5 306 aaPredicted RBP3.02□□□□□ -1.93
PMS1-215ENST00000447232 SLCO5A1Q9H2Y9 848 aa3.02□□□□□ -1.93
PMS1-215ENST00000447232 ASB8Q9H765 288 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms