RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 S100A14Q9HCY8 104 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 COMMD3-BMI1R4GMX3 469 aa8.29□□□□□ -1.08
PTPN3-204ENST00000446349 TOR1BO14657 336 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 ARL6IP5O75915 188 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 KCNK5O95279 499 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 JUPP14923 745 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 BDKRB1P46663 353 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 SOX9P48436 509 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 ELF3P78545 371 aaPredicted RBP8.28□□□□□ -1.08
PTPN3-204ENST00000446349 SWI5Q1ZZU3 235 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 RNF111Q6ZNA4 994 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 CLNKQ7Z7G1 428 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 ORAI3Q9BRQ5 295 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 MKL2Q9ULH7 1088 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 R3HDM2Q9Y2K5 976 aaKnown RBP8.28□□□□□ -1.08
PTPN3-204ENST00000446349 DAPL1A0PJW8 107 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 C1orf226A1L170 272 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 BRINP1O60477 761 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 BANF1O75531 89 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 CD48P09326 243 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 IRF2P14316 349 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 OR3A3P47888 321 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 OR3A2P47893 321 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 SRP54P61011 504 aaKnown RBP8.28□□□□□ -1.08
PTPN3-204ENST00000446349 IQCCQ4KMZ1 466 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 C2CD4AQ8NCU7 369 aaPredicted RBP8.28□□□□□ -1.08
PTPN3-204ENST00000446349 PROKR2Q8NFJ6 384 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 OR6N1Q8NGY5 312 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 SLC17A7Q9P2U7 560 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 FTSJ1Q9UET6 329 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 PEX16Q9Y5Y5 336 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 KIR2DS5A0A0G2JLQ3 304 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 A0A0G2JNG1 304 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 IQCF5A8MTL0 148 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 KIR2DS3K7RE56 304 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 NIPSNAP2O75323 286 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 TGFB1P01137 390 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 KLK1P06870 262 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 CXCL12P48061 93 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 XKP51811 444 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 KCNJ2P63252 427 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 ARHGAP8P85298 464 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 TARDBPQ13148 414 aaKnown RBP eCLIP8.28□□□□□ -1.08
PTPN3-204ENST00000446349 KIR2DS5Q14953 304 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 THOC7Q6I9Y2 204 aaKnown RBP8.28□□□□□ -1.08
PTPN3-204ENST00000446349 GPR65Q8IYL9 337 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 Q8N9G6 341 aaPredicted RBP8.28□□□□□ -1.08
PTPN3-204ENST00000446349 OR10A6Q8NH74 314 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 TRMT2BQ96GJ1 504 aaKnown RBP8.28□□□□□ -1.08
PTPN3-204ENST00000446349 ZNF570Q96NI8 536 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 GPR174Q9BXC1 333 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 FKBP14Q9NWM8 211 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 SLC22A14Q9Y267 594 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 AP1M2Q9Y6Q5 423 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 C4AP0C0L4 1744 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.28□□□□□ -1.08
PTPN3-204ENST00000446349 PRSS51A0A1B0GVH4 220 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 NPIPA2E9PIF3 369 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 NPIPA3F8WFD2 350 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 M0QZQ0 153 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 P04436 131 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 AQP1P29972 269 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 PSPHP78330 225 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 NR0B2Q15466 257 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 LDB1Q86U70 411 aaPredicted RBP8.28□□□□□ -1.08
PTPN3-204ENST00000446349 GID4Q8IVV7 300 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 RTP3Q9BQQ7 232 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 TMEM14AQ9Y6G1 99 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 A0A1W2PPM1 405 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 LEFTY1O75610 366 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 PTGIRP43119 386 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 SLC25A11Q02978 314 aaKnown RBP8.28□□□□□ -1.08
PTPN3-204ENST00000446349 MVKQ03426 396 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 FOLH1Q04609 750 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 CD47Q08722 323 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 LMAN2Q12907 356 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 RBM48Q5RL73 367 aaKnown RBP8.28□□□□□ -1.08
PTPN3-204ENST00000446349 TMEM198Q66K66 360 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 MSANTD1Q6ZTZ1 278 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 HEATR4Q86WZ0 1026 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 HLA-CQ95604 372 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 MMABQ96EY8 250 aaPredicted RBP8.28□□□□□ -1.08
PTPN3-204ENST00000446349 EIF3KQ9UBQ5 218 aaKnown RBP8.28□□□□□ -1.08
PTPN3-204ENST00000446349 PDE4DIPQ5VU43 2346 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 S1PR4O95977 384 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 MMP2P08253 660 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 ACRV1P26436 265 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 RYKP34925 604 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 CDH12P55289 794 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 KCNC4Q03721 635 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 BANPQ8N9N5 519 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 OR10H4Q8NGA5 316 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 ZNF382Q96SR6 550 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 TIMMDC1Q9NPL8 285 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 KLHL42Q9P2K6 505 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 B4GALT6Q9UBX8 382 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 RCCD1A6NED2 376 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 PEPDP12955 493 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 KCNJ11Q14654 390 aa8.28□□□□□ -1.08
PTPN3-204ENST00000446349 TRAM2Q15035 370 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms