RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 ARRDC3Q96B67 414 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 CXorf40BQ96DE9 158 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 RAD9AQ99638 391 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 OR2AG1Q9H205 316 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 MYO7AQ13402 2215 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 GNG14A0A1W2PPG7 69 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 ADH1CP00326 375 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 CLK3P49761 638 aaKnown RBP17.16■□□□□ 0.34
CLDN9-201ENST00000445369 RGNQ15493 299 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 ZNF385BQ569K4 471 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 HORMAD1Q86X24 394 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 TRAPPC5Q8IUR0 188 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 ETFBKMTQ8IXQ9 262 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 LAS2Q8IYD9 372 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 SETD9Q8NE22 299 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 BPIFB6Q8NFQ5 453 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 B4GALNT2Q8NHY0 566 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.16■□□□□ 0.34
CLDN9-201ENST00000445369 CNIH3Q8TBE1 160 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 TBC1D15Q8TC07 691 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 ZNF707Q96C28 371 aaPredicted RBP17.16■□□□□ 0.34
CLDN9-201ENST00000445369 RSPRY1Q96DX4 576 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 NUS1Q96E22 293 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 THAP11Q96EK4 314 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 ASPSCR1Q9BZE9 553 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 PLGRKTQ9HBL7 147 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 ZNF282Q9UDV7 671 aaPredicted RBP17.16■□□□□ 0.34
CLDN9-201ENST00000445369 ATP6V1HQ9UI12 483 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 AP1M2Q9Y6Q5 423 aa17.16■□□□□ 0.34
CLDN9-201ENST00000445369 LAMA2P24043 3122 aaKnown RBP17.16■□□□□ 0.34
CLDN9-201ENST00000445369 A0A0J9YVX5 310 aa17.15■□□□□ 0.34
CLDN9-201ENST00000445369 PRRT4C9JH25 899 aa17.15■□□□□ 0.34
CLDN9-201ENST00000445369 M0QX08 132 aa17.15■□□□□ 0.34
CLDN9-201ENST00000445369 FOXE1O00358 373 aaPredicted RBP17.15■□□□□ 0.34
CLDN9-201ENST00000445369 ZNF197O14709 1029 aa17.15■□□□□ 0.34
CLDN9-201ENST00000445369 DPM1O60762 260 aa17.15■□□□□ 0.34
CLDN9-201ENST00000445369 JRKO75564 520 aa17.15■□□□□ 0.34
CLDN9-201ENST00000445369 FKBP9O95302 570 aa17.15■□□□□ 0.34
CLDN9-201ENST00000445369 ZNF8P17098 575 aaPredicted RBP17.15■□□□□ 0.34
CLDN9-201ENST00000445369 ITIH1P19827 911 aa17.15■□□□□ 0.34
CLDN9-201ENST00000445369 PCMT1P22061 227 aa17.15■□□□□ 0.34
CLDN9-201ENST00000445369 PCGF2P35227 344 aa17.15■□□□□ 0.34
CLDN9-201ENST00000445369 IL5RAQ01344 420 aa17.15■□□□□ 0.34
CLDN9-201ENST00000445369 ZNF763Q0D2J5 394 aa17.15■□□□□ 0.34
CLDN9-201ENST00000445369 LRRC74AQ0VAA2 488 aa17.15■□□□□ 0.34
CLDN9-201ENST00000445369 CAMK1Q14012 370 aa17.15■□□□□ 0.34
CLDN9-201ENST00000445369 SLBPQ14493 270 aaKnown RBP eCLIP17.15■□□□□ 0.34
CLDN9-201ENST00000445369 C10orf62Q5T681 223 aaPredicted RBP17.15■□□□□ 0.34
CLDN9-201ENST00000445369 PDE12Q6L8Q7 609 aaKnown RBP17.15■□□□□ 0.34
CLDN9-201ENST00000445369 LRRC56Q8IYG6 542 aaPredicted RBP17.15■□□□□ 0.34
CLDN9-201ENST00000445369 EZH1Q92800 747 aaPredicted RBP17.15■□□□□ 0.34
CLDN9-201ENST00000445369 TANKQ92844 425 aa17.15■□□□□ 0.34
CLDN9-201ENST00000445369 NODALQ96S42 347 aa17.15■□□□□ 0.34
CLDN9-201ENST00000445369 EFCAB11Q9BUY7 163 aa17.15■□□□□ 0.34
CLDN9-201ENST00000445369 BHLHE41Q9C0J9 482 aaPredicted RBP17.15■□□□□ 0.34
CLDN9-201ENST00000445369 RIBC2Q9H4K1 309 aa17.15■□□□□ 0.34
CLDN9-201ENST00000445369 GPN2Q9H9Y4 310 aaPredicted RBP17.15■□□□□ 0.34
CLDN9-201ENST00000445369 PDP1Q9P0J1 537 aaPredicted RBP17.15■□□□□ 0.34
CLDN9-201ENST00000445369 BAG5Q9UL15 447 aa17.15■□□□□ 0.34
CLDN9-201ENST00000445369 VPS4AQ9UN37 437 aa17.15■□□□□ 0.34
CLDN9-201ENST00000445369 MRPS23Q9Y3D9 190 aaKnown RBP17.15■□□□□ 0.34
CLDN9-201ENST00000445369 SAMHD1Q9Y3Z3 626 aaKnown RBP17.15■□□□□ 0.34
CLDN9-201ENST00000445369 DYRK1BQ9Y463 629 aa17.15■□□□□ 0.34
CLDN9-201ENST00000445369 HSPE1-MOB4S4R3N1 261 aa17.15■□□□□ 0.34
CLDN9-201ENST00000445369 KIF26AQ9ULI4 1882 aaPredicted RBP17.15■□□□□ 0.34
CLDN9-201ENST00000445369 PIPSLA2A3N6 862 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 C1GALT1C1LP0DN25 315 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 HLA-EP13747 358 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 CCR3P51677 355 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 MAPK10P53779 464 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 ELP6Q0PNE2 266 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 STARD3Q14849 445 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 RAET1GQ6H3X3 334 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 ARMCX6Q7L4S7 300 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 CROCCP3Q8IVE0 287 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 TMIEQ8NEW7 156 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 OR4A15Q8NGL6 344 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 OR9A1PQ8NGU1 263 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 ARMC5Q96C12 935 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 C7orf34Q96L11 122 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 LINC00615Q96LM1 132 aaPredicted RBP17.14■□□□□ 0.33
CLDN9-201ENST00000445369 EHD1Q9H4M9 534 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 REEP4Q9H6H4 257 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 DMRT3Q9NQL9 472 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 SH3BP4Q9P0V3 963 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 SNX5Q9Y5X3 404 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 TMEM229AB2RXF0 380 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 DNAJB5O75953 348 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 PAPLNO95428 1278 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 ANGPTL1O95841 491 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 CYP4B1P13584 511 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 C6P13671 934 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 GPR1P46091 355 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 GALK1P51570 392 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 KCNJ10P78508 379 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 SIM2Q14190 667 aaPredicted RBP17.14■□□□□ 0.33
CLDN9-201ENST00000445369 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.14■□□□□ 0.33
CLDN9-201ENST00000445369 C9orf64Q5T6V5 341 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 COMMD6Q7Z4G1 85 aa17.14■□□□□ 0.33
CLDN9-201ENST00000445369 ZNF547Q8IVP9 402 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms