RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 IPO13O94829 963 aaKnown RBP13.31□□□□□ -0.28
TREX1-202ENST00000444177 WISP3O95389 354 aaPredicted RBP13.31□□□□□ -0.28
TREX1-202ENST00000444177 CCDC166P0CW27 439 aa13.31□□□□□ -0.28
TREX1-202ENST00000444177 NCF1P14598 390 aaPredicted RBP13.31□□□□□ -0.28
TREX1-202ENST00000444177 NPPBP16860 134 aa13.31□□□□□ -0.28
TREX1-202ENST00000444177 PHBP35232 272 aa13.31□□□□□ -0.28
TREX1-202ENST00000444177 EMP3P54852 163 aa13.31□□□□□ -0.28
TREX1-202ENST00000444177 RAB10P61026 200 aa13.31□□□□□ -0.28
TREX1-202ENST00000444177 AIMP2Q13155 320 aaKnown RBP13.31□□□□□ -0.28
TREX1-202ENST00000444177 ZKSCAN8Q15776 578 aaPredicted RBP13.31□□□□□ -0.28
TREX1-202ENST00000444177 UAP1Q16222 522 aaPredicted RBP13.31□□□□□ -0.28
TREX1-202ENST00000444177 NDUFA9Q16795 377 aa13.31□□□□□ -0.28
TREX1-202ENST00000444177 ZXDCQ2QGD7 858 aaPredicted RBP13.31□□□□□ -0.28
TREX1-202ENST00000444177 GARNL3Q5VVW2 1013 aa13.31□□□□□ -0.28
TREX1-202ENST00000444177 KIRREL2Q6UWL6 708 aa13.31□□□□□ -0.28
TREX1-202ENST00000444177 CMC1Q7Z7K0 106 aa13.31□□□□□ -0.28
TREX1-202ENST00000444177 ZADH2Q8N4Q0 377 aa13.31□□□□□ -0.28
TREX1-202ENST00000444177 CISD2Q8N5K1 135 aaKnown RBP13.31□□□□□ -0.28
TREX1-202ENST00000444177 SLC5A11Q8WWX8 675 aa13.31□□□□□ -0.28
TREX1-202ENST00000444177 SNRNP40Q96DI7 357 aaKnown RBP13.31□□□□□ -0.28
TREX1-202ENST00000444177 OR4K3Q96R72 315 aa13.31□□□□□ -0.28
TREX1-202ENST00000444177 YIPF2Q9BWQ6 316 aa13.31□□□□□ -0.28
TREX1-202ENST00000444177 FUT8Q9BYC5 575 aa13.31□□□□□ -0.28
TREX1-202ENST00000444177 DERL2Q9GZP9 239 aa13.31□□□□□ -0.28
TREX1-202ENST00000444177 ZBTB20Q9HC78 741 aaPredicted RBP13.31□□□□□ -0.28
TREX1-202ENST00000444177 MAP10Q9P2G4 905 aa13.31□□□□□ -0.28
TREX1-202ENST00000444177 CDC14AQ9UNH5 594 aa13.31□□□□□ -0.28
TREX1-202ENST00000444177 HS3ST3B1Q9Y662 390 aa13.31□□□□□ -0.28
TREX1-202ENST00000444177 CENPEQ02224 2701 aa13.31□□□□□ -0.28
TREX1-202ENST00000444177 HEATR5BQ9P2D3 2071 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 A0A0A6YYC8 382 aaPredicted RBP13.3□□□□□ -0.28
TREX1-202ENST00000444177 I3L1I5 382 aaPredicted RBP13.3□□□□□ -0.28
TREX1-202ENST00000444177 FFAR3O14843 346 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 GPR42O15529 346 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 ALOX12BO75342 701 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 AGFG2O95081 481 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 CD1DP15813 335 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 ITGA3P26006 1051 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 BCL6P41182 706 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 HNMTP50135 292 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 CCR8P51685 355 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 CDKL1Q00532 357 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 MEF2AQ02078 507 aaPredicted RBP13.3□□□□□ -0.28
TREX1-202ENST00000444177 OCA2Q04671 838 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 CSHL1Q14406 222 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 EIF2S3LQ2VIR3 472 aaKnown RBP13.3□□□□□ -0.28
TREX1-202ENST00000444177 CATSPEREQ5SY80 951 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 UBAP2Q5T6F2 1119 aaKnown RBP13.3□□□□□ -0.28
TREX1-202ENST00000444177 VN1R4Q7Z5H5 301 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 TMPRSS11BQ86T26 416 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 ASPGQ86U10 573 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 THOC6Q86W42 341 aaKnown RBP13.3□□□□□ -0.28
TREX1-202ENST00000444177 PRSS58Q8IYP2 241 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 IQCKQ8N0W5 287 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 ZCCHC10Q8TBK6 192 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 TM9SF4Q92544 642 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 EXT2Q93063 718 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 NEIL2Q969S2 332 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 MIEF2Q96C03 454 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 THAP11Q96EK4 314 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 MVB12AQ96EY5 273 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 MMABQ96EY8 250 aaPredicted RBP13.3□□□□□ -0.28
TREX1-202ENST00000444177 MACROD1Q9BQ69 325 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 CRB3Q9BUF7 120 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 DRC3Q9H069 523 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 CDC42EP4Q9H3Q1 356 aaKnown RBP13.3□□□□□ -0.28
TREX1-202ENST00000444177 SEMA3GQ9NS98 782 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 WWOXQ9NZC7 414 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 ZNF282Q9UDV7 671 aaPredicted RBP13.3□□□□□ -0.28
TREX1-202ENST00000444177 NFU1Q9UMS0 254 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 DOPEY1Q5JWR5 2465 aa13.3□□□□□ -0.28
TREX1-202ENST00000444177 KCNE1BA0A087WTH5 132 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 WDR47O94967 919 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 ACSL3O95573 720 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 SLC35G6P0C7Q6 338 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 GMPRP36959 345 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 ATP6V0D1P61421 351 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 MRPL49Q13405 166 aaKnown RBP13.29□□□□□ -0.28
TREX1-202ENST00000444177 BMPR2Q13873 1038 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 DSG2Q14126 1118 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 TGFBIQ15582 683 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 RBBP7Q16576 425 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 C18orf21Q32NC0 220 aaPredicted RBP13.29□□□□□ -0.28
TREX1-202ENST00000444177 CRB2Q5IJ48 1285 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 Q6ZS92 163 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 TBC1D1Q86TI0 1168 aaPredicted RBP13.29□□□□□ -0.28
TREX1-202ENST00000444177 GPSM1Q86YR5 675 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 PARP9Q8IXQ6 854 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 TBC1D19Q8N5T2 526 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 CAMKVQ8NCB2 501 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 ABHD11Q8NFV4 315 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 OR11G2Q8NGC1 345 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 STT3BQ8TCJ2 826 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 CYTH2Q99418 400 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 SLC29A3Q9BZD2 475 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 ANKZF1Q9H8Y5 726 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 ASF1BQ9NVP2 202 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 TRPC4Q9UBN4 977 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 SLC22A14Q9Y267 594 aa13.29□□□□□ -0.28
TREX1-202ENST00000444177 MRPS2Q9Y399 296 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms