RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 ARL8BQ9NVJ2 186 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 DUSP12Q9UNI6 340 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 SAMD4AQ9UPU9 718 aaKnown RBP13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 ELOVL7A1L3X0 281 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 SHOX2O60902 331 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 JUNP05412 331 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 HBQ1P09105 142 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 MTHFD1P11586 935 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 RNH1P13489 461 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 ATP6V1B1P15313 513 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 RPL4P36578 427 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 OR4D1Q15615 310 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 DUOXA1Q1HG43 343 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 PROSER1Q86XN7 944 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 MCEMP1Q8IX19 187 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 PEX5LQ8IYB4 626 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 SDR16C5Q8N3Y7 309 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 MKRN2Q9H000 416 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 GPRC5BQ9NZH0 403 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 SCN1AP35498 2009 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 CCDC159P0C7I6 412 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 TMEM198Q66K66 360 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 NEK10Q6ZWH5 1172 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 SYT13Q7L8C5 426 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 TRIM73Q86UV7 250 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 CROCCP3Q8IVE0 287 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 DNAJB8Q8NHS0 232 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 VANGL1Q8TAA9 524 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 FUBP1Q96AE4 644 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 NSUN5Q96P11 429 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 ZNF184Q99676 751 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 ZFYVE21Q9BQ24 234 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 OR8D2Q9GZM6 311 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 CAPN14A8MX76 684 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 TOR1BO14657 336 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 KLF11O14901 512 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 GMFGO60234 142 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 CCR7P32248 378 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 FEN1P39748 380 aaKnown RBP13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 GSSP48637 474 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 HK3P52790 923 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 ZNF763Q0D2J5 394 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 ZNF544Q6NX49 715 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 CADM2Q8N3J6 435 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 OR52E1Q8NGJ3 308 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 EBF4Q9BQW3 602 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 POT1Q9NUX5 634 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 OR6C2Q9NZP2 312 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 PSME4Q14997 1843 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 POLR1CO15160 346 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 BMP7P18075 431 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 ISCA2Q86U28 154 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 TBC1D10AQ9BXI6 508 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 SLC6A14Q9UN76 642 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 SH3GLB1Q9Y371 365 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 PRSS21Q9Y6M0 314 aa13.6□□□□□ -0.23
SMARCA4-204ENST00000444061 HSD3B1P14060 373 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 PAICSP22234 425 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 HSD3B2P26439 372 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 ARSFP54793 590 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 MTAPQ13126 283 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 HERC3Q15034 1050 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 DEFB110Q30KQ9 67 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 AGAP11Q8TF27 550 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 SNRNP27Q8WVK2 155 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 C5orf34Q96MH7 638 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 C9orf16Q9BUW7 83 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 ALKBH4Q9NXW9 302 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 C17orf113A0A1B0GUU1 675 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 FEZF1A0PJY2 475 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 C8orf89P0DMQ9 161 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 NR1D2Q14995 579 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 REP15Q6BDI9 236 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 GLYATQ6IB77 296 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 OR4F3Q6IEY1 312 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 OR4K14Q8NGD5 310 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 TBL1XR1Q9BZK7 514 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 AP1G1O43747 822 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 OR10H3O60404 316 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 TNFAIP8O95379 198 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 IL7RP16871 459 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 SPIBQ01892 262 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 ID2Q02363 134 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 LEXMQ3ZCV2 418 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 MFSD2AQ8NA29 543 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 ANKRD49Q8WVL7 239 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 RASSF5Q8WWW0 418 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 CNBD2Q96M20 576 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 CMKLR1Q99788 373 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 ZNF395Q9H8N7 513 aaPredicted RBP13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 EXOSC4Q9NPD3 245 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 ZIM2Q9NZV7 527 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 STOML2Q9UJZ1 356 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 UNC50Q53HI1 259 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 AFMIDQ63HM1 303 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 TSSK4Q6SA08 328 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 NRROSQ86YC3 692 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 F2RL3Q96RI0 385 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 RIBC2Q9H4K1 309 aa13.59□□□□□ -0.23
SMARCA4-204ENST00000444061 Q9N2J8 555 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms