RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 COLEC10Q9Y6Z7 277 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 DOCK9Q9BZ29 2069 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 ANKRD12Q6UB98 2062 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 KCNE1BA0A087WTH5 132 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 B2RBV5 119 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 PSMD12O00232 456 aaPredicted RBP7.79□□□□□ -1.16
CCDC39-201ENST00000442201 DENRO43583 198 aaKnown RBP7.79□□□□□ -1.16
CCDC39-201ENST00000442201 SCO2O43819 266 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 ALDOCP09972 364 aaKnown RBP7.79□□□□□ -1.16
CCDC39-201ENST00000442201 MTHFD1P11586 935 aaKnown RBP7.79□□□□□ -1.16
CCDC39-201ENST00000442201 COX4I1P13073 169 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 IL32P24001 234 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 NDUFS1P28331 727 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 CD38P28907 300 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 PCYT1AP49585 367 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 CLK1P49759 484 aaKnown RBP7.79□□□□□ -1.16
CCDC39-201ENST00000442201 NUP107P57740 925 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 ERVK-8P63133 956 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 C19orf57Q0VDD7 668 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 FZD2Q14332 565 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 PDK3Q15120 406 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 CYP2A13Q16696 494 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 C6orf136Q5SQH8 315 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 FRG2Q64ET8 278 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 TRIM46Q7Z4K8 759 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 TMPRSS11BQ86T26 416 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 PARGQ86W56 976 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 TMEM151BQ8IW70 566 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 LMNTD1Q8N9Z9 388 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 MFSD2AQ8NA29 543 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 FNDC5Q8NAU1 212 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 SMPDL3AQ92484 453 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 STMN2Q93045 179 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 HSPA12BQ96MM6 686 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 FRG2BQ96QU4 278 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 PCBD2Q9H0N5 130 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 SIAEQ9HAT2 523 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 FARSBQ9NSD9 589 aaKnown RBP7.79□□□□□ -1.16
CCDC39-201ENST00000442201 DCAF16Q9NXF7 216 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 TMCC3Q9ULS5 477 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 CFL2Q9Y281 166 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 GYG2O15488 501 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 CLOCKO15516 846 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 CTSEP14091 401 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 CASP2P42575 452 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 RAB28P51157 221 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 RACK1P63244 317 aaKnown RBP7.78□□□□□ -1.16
CCDC39-201ENST00000442201 ZNF33BQ06732 778 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 AP5B1Q2VPB7 878 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 GRHL2Q6ISB3 625 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 LCTLQ6UWM7 567 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 SLCO4C1Q6ZQN7 724 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 LPCAT2Q7L5N7 544 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 PHACTR4Q8IZ21 702 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 SFRP1Q8N474 314 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 C2orf73Q8N5S3 287 aaPredicted RBP7.78□□□□□ -1.16
CCDC39-201ENST00000442201 RP9Q8TA86 221 aaKnown RBP7.78□□□□□ -1.16
CCDC39-201ENST00000442201 MTFMTQ96DP5 389 aaKnown RBP7.78□□□□□ -1.16
CCDC39-201ENST00000442201 MENTQ9BUN1 341 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 EFCAB11Q9BUY7 163 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 GSDMCQ9BYG8 508 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 MIR1-1HGQ9H1L0 117 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 SPATA6Q9NWH7 488 aaPredicted RBP7.78□□□□□ -1.16
CCDC39-201ENST00000442201 SLCO1B1Q9Y6L6 691 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 C15orf38-AP3S2A0A0A6YYH1 394 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 H0YIV9 168 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 PGM3O95394 542 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 PDGFBP01127 241 aaPredicted RBP7.78□□□□□ -1.16
CCDC39-201ENST00000442201 PDYNP01213 254 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 F3P13726 295 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 POLR2CP19387 275 aaPredicted RBP7.78□□□□□ -1.16
CCDC39-201ENST00000442201 CD22P20273 847 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 MAOBP27338 520 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 STT3AP46977 705 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 C16orf72Q14CZ0 275 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 HERC3Q15034 1050 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 MAPRE2Q15555 327 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 AGKQ53H12 422 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 ZNF542PQ5EBM4 170 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 PAGE2BQ5JRK9 111 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 ARPINQ7Z6K5 226 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 IQCHQ86VS3 1027 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 SNX32Q86XE0 403 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 MIER2Q8N344 545 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 SLC5A11Q8WWX8 675 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 CXorf40BQ96DE9 158 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 PHF12Q96QT6 1004 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 ACAT2Q9BWD1 397 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 TAS2R1Q9NYW7 299 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 ATPIF1Q9UII2 106 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 CCL27Q9Y4X3 112 aa7.78□□□□□ -1.16
CCDC39-201ENST00000442201 CCDC163A0A0D9SF12 145 aa7.77□□□□□ -1.16
CCDC39-201ENST00000442201 EML2O95834 649 aa7.77□□□□□ -1.16
CCDC39-201ENST00000442201 C1GALT1C1LP0DN25 315 aa7.77□□□□□ -1.16
CCDC39-201ENST00000442201 HOXA6P31267 233 aa7.77□□□□□ -1.16
CCDC39-201ENST00000442201 DIO3P55073 304 aa7.77□□□□□ -1.16
CCDC39-201ENST00000442201 HMGCS1Q01581 520 aa7.77□□□□□ -1.16
CCDC39-201ENST00000442201 EMX2Q04743 252 aa7.77□□□□□ -1.16
CCDC39-201ENST00000442201 CD300CQ08708 224 aa7.77□□□□□ -1.16
CCDC39-201ENST00000442201 ATG9BQ674R7 924 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms