RNA–Protein interactions for RNA: ENST00000440447.2

PTX4-202, Transcript of pentraxin 4, humanhuman

TSL 5 BASIC

Gene PTX4, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-202ENST00000440447 PGM2Q96G03 612 aa17.41■□□□□ 0.38
PTX4-202ENST00000440447 C10orf90Q96M02 699 aa17.41■□□□□ 0.38
PTX4-202ENST00000440447 MACROD1Q9BQ69 325 aa17.41■□□□□ 0.38
PTX4-202ENST00000440447 C17orf62Q9BQA9 187 aa17.41■□□□□ 0.38
PTX4-202ENST00000440447 C1QTNF3Q9BXJ4 246 aa17.41■□□□□ 0.38
PTX4-202ENST00000440447 ERVK-6Q9BXR3 956 aa17.41■□□□□ 0.38
PTX4-202ENST00000440447 STMN4Q9H169 189 aaPredicted RBP17.41■□□□□ 0.38
PTX4-202ENST00000440447 CHST8Q9H2A9 424 aa17.41■□□□□ 0.38
PTX4-202ENST00000440447 C12orf65Q9H3J6 166 aaKnown RBP17.41■□□□□ 0.38
PTX4-202ENST00000440447 NOL11Q9H8H0 719 aaKnown RBP17.41■□□□□ 0.38
PTX4-202ENST00000440447 ACTR8Q9H981 624 aa17.41■□□□□ 0.38
PTX4-202ENST00000440447 GPN2Q9H9Y4 310 aaPredicted RBP17.41■□□□□ 0.38
PTX4-202ENST00000440447 COPG2Q9UBF2 871 aa17.41■□□□□ 0.38
PTX4-202ENST00000440447 CROTQ9UKG9 612 aa17.41■□□□□ 0.38
PTX4-202ENST00000440447 ACACBO00763 2458 aa17.41■□□□□ 0.38
PTX4-202ENST00000440447 APC2O95996 2303 aa17.41■□□□□ 0.38
PTX4-202ENST00000440447 ANKDD1BA6NHY2 528 aa17.4■□□□□ 0.38
PTX4-202ENST00000440447 C9J4A7 227 aa17.4■□□□□ 0.38
PTX4-202ENST00000440447 G3V2L1 256 aa17.4■□□□□ 0.38
PTX4-202ENST00000440447 PIM1P11309 404 aaPredicted RBP17.4■□□□□ 0.38
PTX4-202ENST00000440447 CPA3P15088 417 aa17.4■□□□□ 0.38
PTX4-202ENST00000440447 CD22P20273 847 aa17.4■□□□□ 0.38
PTX4-202ENST00000440447 IMPDH1P20839 514 aa17.4■□□□□ 0.38
PTX4-202ENST00000440447 ITPKBP27987 946 aa17.4■□□□□ 0.38
PTX4-202ENST00000440447 ARL1P40616 181 aaPredicted RBP17.4■□□□□ 0.38
PTX4-202ENST00000440447 HNF4AP41235 474 aa17.4■□□□□ 0.38
PTX4-202ENST00000440447 CCNG1P51959 295 aa17.4■□□□□ 0.38
PTX4-202ENST00000440447 CYP4F2P78329 520 aa17.4■□□□□ 0.38
PTX4-202ENST00000440447 TLE3Q04726 772 aa17.4■□□□□ 0.38
PTX4-202ENST00000440447 E2F2Q14209 437 aa17.4■□□□□ 0.38
PTX4-202ENST00000440447 NKAIN1Q4KMZ8 207 aa17.4■□□□□ 0.38
PTX4-202ENST00000440447 ZNF678Q5SXM1 525 aa17.4■□□□□ 0.38
PTX4-202ENST00000440447 LIPJQ5W064 366 aa17.4■□□□□ 0.38
PTX4-202ENST00000440447 ZNF385CQ66K41 422 aaPredicted RBP17.4■□□□□ 0.38
PTX4-202ENST00000440447 PRMT9Q6P2P2 845 aa17.4■□□□□ 0.38
PTX4-202ENST00000440447 ZNF517Q6ZMY9 492 aaPredicted RBP17.4■□□□□ 0.38
PTX4-202ENST00000440447 MYLK4Q86YV6 388 aaPredicted RBP17.4■□□□□ 0.38
PTX4-202ENST00000440447 NT5CQ8TCD5 201 aa17.4■□□□□ 0.38
PTX4-202ENST00000440447 ZNF483Q8TF39 744 aaPredicted RBP17.4■□□□□ 0.38
PTX4-202ENST00000440447 SEC16BQ96JE7 1060 aa17.4■□□□□ 0.38
PTX4-202ENST00000440447 NSUN5Q96P11 429 aaKnown RBP17.4■□□□□ 0.38
PTX4-202ENST00000440447 PRM3Q9NNZ6 103 aa17.4■□□□□ 0.38
PTX4-202ENST00000440447 IFT80Q9P2H3 777 aaPredicted RBP17.4■□□□□ 0.38
PTX4-202ENST00000440447 CDC14AQ9UNH5 594 aa17.4■□□□□ 0.38
PTX4-202ENST00000440447 C21orf140B9A014 251 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 UGDHO60701 494 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 SUPT7LO94864 414 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 MED26O95402 600 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 ATXN8OSP0DMR3 200 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 LIFP15018 202 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 CREB1P16220 341 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 UCNP55089 124 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 RPS15P62841 145 aaKnown RBP17.39■□□□□ 0.37
PTX4-202ENST00000440447 DNASE1L3Q13609 305 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 FAM53BQ14153 422 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 RBBP7Q16576 425 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 UNC50Q53HI1 259 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 TNFAIP8L3Q5GJ75 292 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 GRHL2Q6ISB3 625 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 LCN10Q6JVE6 187 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 MED27Q6P2C8 311 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 HDXQ7Z353 690 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 EXOC3L1Q86VI1 746 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.39■□□□□ 0.37
PTX4-202ENST00000440447 ARHGEF39Q8N4T4 335 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 METTL27Q8N6F8 245 aaPredicted RBP17.39■□□□□ 0.37
PTX4-202ENST00000440447 KCT2Q8NC54 265 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 ARMC2Q8NEN0 867 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 TCP10LQ8TDR4 215 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 CCT6BQ92526 530 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 L3HYPDHQ96EM0 354 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 MOCOSQ96EN8 888 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 MVB12AQ96EY5 273 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 FAM111AQ96PZ2 611 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 TMEM237Q96Q45 408 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 DRC3Q9H069 523 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 ZBTB26Q9HCK0 441 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 SEMA4BQ9NPR2 832 aaPredicted RBP17.39■□□□□ 0.37
PTX4-202ENST00000440447 GPN3Q9UHW5 284 aaPredicted RBP17.39■□□□□ 0.37
PTX4-202ENST00000440447 KCND3Q9UK17 655 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 ZNF490Q9ULM2 529 aaPredicted RBP17.39■□□□□ 0.37
PTX4-202ENST00000440447 SSUH2Q9Y2M2 353 aa17.39■□□□□ 0.37
PTX4-202ENST00000440447 HEATR5BQ9P2D3 2071 aa17.38■□□□□ 0.37
PTX4-202ENST00000440447 URADA6NGE7 173 aa17.38■□□□□ 0.37
PTX4-202ENST00000440447 OR7A17O14581 309 aa17.38■□□□□ 0.37
PTX4-202ENST00000440447 CLDN9O95484 217 aa17.38■□□□□ 0.37
PTX4-202ENST00000440447 SERPINA6P08185 405 aa17.38■□□□□ 0.37
PTX4-202ENST00000440447 RAB40ALP0C0E4 278 aa17.38■□□□□ 0.37
PTX4-202ENST00000440447 CDH13P55290 713 aa17.38■□□□□ 0.37
PTX4-202ENST00000440447 CLCQ05315 142 aa17.38■□□□□ 0.37
PTX4-202ENST00000440447 SRSF6Q13247 344 aaKnown RBP17.38■□□□□ 0.37
PTX4-202ENST00000440447 MLIPQ5VWP3 458 aa17.38■□□□□ 0.37
PTX4-202ENST00000440447 TMEM214Q6NUQ4 689 aaKnown RBP17.38■□□□□ 0.37
PTX4-202ENST00000440447 CCDC81Q6ZN84 652 aa17.38■□□□□ 0.37
PTX4-202ENST00000440447 RPS27LQ71UM5 84 aaKnown RBP17.38■□□□□ 0.37
PTX4-202ENST00000440447 MILR1Q7Z6M3 343 aa17.38■□□□□ 0.37
PTX4-202ENST00000440447 L3MBTL4Q8NA19 623 aa17.38■□□□□ 0.37
PTX4-202ENST00000440447 OR52B6Q8NGF0 335 aa17.38■□□□□ 0.37
PTX4-202ENST00000440447 ZCCHC10Q8TBK6 192 aa17.38■□□□□ 0.37
PTX4-202ENST00000440447 CREB3L4Q8TEY5 395 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms