RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 DQX1Q8TE96 717 aaKnown RBP3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 GLMPQ8WWB7 406 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 ARNTL2Q8WYA1 636 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 RSPH1Q8WYR4 309 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 NPIPB3Q92617 1050 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 ATP2A3Q93084 1043 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 HDAC11Q96DB2 347 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 ELP4Q96EB1 424 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 CERS2Q96G23 380 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 ZNF845Q96IR2 970 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 NSL1Q96IY1 281 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 FAR2Q96K12 515 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 PPP1R2P1Q96PQ5 205 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 PKMYT1Q99640 499 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 CPNE1Q99829 537 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 RTP3Q9BQQ7 232 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 SIKE1Q9BRV8 207 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 MLPHQ9BV36 600 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 SF3B5Q9BWJ5 86 aaKnown RBP3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 TM2D2Q9BX73 214 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 SLC25A18Q9H1K4 315 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 GBA3Q9H227 469 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 LRMDAQ9H2I8 198 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 HIPK2Q9H2X6 1198 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 STN1Q9H668 368 aaKnown RBP3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 CATSPERBQ9H7T0 1116 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 LRRC40Q9H9A6 602 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 KCNK13Q9HB14 408 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 RGS18Q9NS28 235 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 TMEM30AQ9NV96 361 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 THAP1Q9NVV9 213 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 ARHGEF38Q9NXL2 777 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 TXNDC16Q9P2K2 825 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 NFKBIL1Q9UBC1 381 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 CACNG4Q9UBN1 327 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 SLC25A10Q9UBX3 287 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 OR12D3Q9UGF7 316 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 LNPEPQ9UIQ6 1025 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 HAO1Q9UJM8 370 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 ADAM28Q9UKQ2 775 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 RPL26L1Q9UNX3 145 aaKnown RBP3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 STK38LQ9Y2H1 464 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 UBE2J1Q9Y385 318 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 RALGAPA2Q2PPJ7 1873 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 FAM237BA0A1B0GVD1 139 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 SLC22A23A1A5C7 686 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 NPIPB15A6NHN6 443 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 AGAP14A8MT82 685 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 I6L893 689 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 DFFAO00273 331 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 RRHO14718 337 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 NKX2-8O15522 239 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 HNRNPRO43390 633 aaKnown RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 TNFSF14O43557 240 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 PLIN3O60664 434 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 CCDC22O60826 627 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 SNNO75324 88 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 TADA2AO75478 443 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 GJB3O75712 270 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 ANXA9O76027 345 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 DDHD2O94830 711 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 PGM3O95394 542 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 IGLV3-25P01717 112 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 DNTTP04053 509 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 KRT16P08779 473 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 ERVK-10P10266 1014 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 SLC2A3P11169 496 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 GLULP15104 373 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 EZRP15311 586 aaKnown RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 ST6GAL1P15907 406 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 PORP16435 677 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 CALB2P22676 271 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 PSMA4P25789 261 aaKnown RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 CCND3P30281 292 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 HOXC13P31276 330 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 CCR1P32246 355 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 GP5P40197 560 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 HADHAP40939 763 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 CDKN2AP42771 156 aaKnown RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 SLC1A6P48664 564 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 SERPINB8P50452 374 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 ACLYP53396 1101 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 CSE1LP55060 971 aaKnown RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 RPL15P61313 204 aaKnown RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 CRADDP78560 199 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 YWHAHQ04917 246 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 PRKCZQ05513 592 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 ZBTB17Q13105 803 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 EIF4EBP2Q13542 120 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 ITGA7Q13683 1181 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 THOC5Q13769 683 aaKnown RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 CAMK1Q14012 370 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 ANXA2RQ3ZCQ2 193 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 CCDC153Q494R4 210 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 ANKRD20A4Q4UJ75 823 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 FASTKD1Q53R41 847 aaKnown RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 WASHC2DQ5SRD0 308 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 FAM69AQ5T7M9 428 aa3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 N4BP2L1Q5TBK1 243 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P11-201ENST00000440127 FAM91A1Q658Y4 838 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms