RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 CSNK1G1Q9HCP0 422 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 AMBNQ9NP70 447 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 HCFC1R1Q9NWW0 138 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 SIRT5Q9NXA8 310 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 ZMYM5Q9UJ78 669 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 TRMT6Q9UJA5 497 aaKnown RBP8.28□□□□□ -1.08
HPS4-206ENST00000439453 PCDHGB2Q9Y5G2 931 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 PCDHGA6Q9Y5G7 932 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 MEIOCA2RUB1 952 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 ZSCAN5BA6NJL1 495 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 MOSPD3O75425 235 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 VPS26AO75436 327 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 SLITRK5O94991 958 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 FKBP9O95302 570 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 VIPP01282 170 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 TRAPPC2P0DI81 140 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 TRAPPC2BP0DI82 140 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 HLA-DPA1P20036 260 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 IFNA8P32881 189 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 IL2P60568 153 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 ZP2Q05996 745 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 PARP15Q460N3 678 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 ARMCX4Q5H9R4 360 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 TMC8Q8IU68 726 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 CYP4Z2PQ8N1L4 340 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 UMODL1-AS1Q8N2C9 162 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 TMEM86AQ8N2M4 240 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 TEX26Q8N6G2 289 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 SCAMP5Q8TAC9 235 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 GGHQ92820 318 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 FATE1Q969F0 183 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 SEMA3CQ99985 751 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 ACBD6Q9BR61 282 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 AFF4Q9UHB7 1163 aaKnown RBP8.28□□□□□ -1.08
HPS4-206ENST00000439453 KIAA1549LQ6ZVL6 1849 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 TICRRQ7Z2Z1 1910 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 LOC730098B7Z3J9 87 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 E9PQ18 207 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 KIAA0513O60268 411 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 NIPSNAP2O75323 286 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 ERN1O75460 977 aaKnown RBP8.28□□□□□ -1.08
HPS4-206ENST00000439453 CCNDBP1O95273 360 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 FABP3P05413 133 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 C8AP07357 584 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 TIE1P35590 1138 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 RGS6P49758 472 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 GTF2H2Q13888 395 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 IRF3Q14653 427 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 ARMC4Q5T2S8 1044 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 TPGS2Q68CL5 300 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 GTF2H2CQ6P1K8 395 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 ELMOD2Q8IZ81 293 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 DNAJC22Q8N4W6 341 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.28□□□□□ -1.08
HPS4-206ENST00000439453 FLCNQ8NFG4 579 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 ST13P5Q8NFI4 369 aaPredicted RBP8.28□□□□□ -1.08
HPS4-206ENST00000439453 HRASLS5Q96KN8 279 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 TRIM62Q9BVG3 475 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 PLCXD1Q9NUJ7 323 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 INSL5Q9Y5Q6 135 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 SNX8Q9Y5X2 465 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 KMT2EQ8IZD2 1858 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 WNT9AO14904 365 aa8.27□□□□□ -1.08
HPS4-206ENST00000439453 RGS14O43566 566 aa8.27□□□□□ -1.08
HPS4-206ENST00000439453 ADORA3P0DMS8 318 aa8.27□□□□□ -1.08
HPS4-206ENST00000439453 TNFSF8P32971 234 aa8.27□□□□□ -1.08
HPS4-206ENST00000439453 CCR2P41597 374 aa8.27□□□□□ -1.08
HPS4-206ENST00000439453 GPR15P49685 360 aa8.27□□□□□ -1.08
HPS4-206ENST00000439453 GPLD1P80108 840 aa8.27□□□□□ -1.08
HPS4-206ENST00000439453 MAD2L1Q13257 205 aaPredicted RBP8.27□□□□□ -1.08
HPS4-206ENST00000439453 CAMK2GQ13555 558 aaPredicted RBP8.27□□□□□ -1.08
HPS4-206ENST00000439453 CACHD1Q5VU97 1274 aa8.27□□□□□ -1.08
HPS4-206ENST00000439453 FAHD1Q6P587 224 aa8.27□□□□□ -1.08
HPS4-206ENST00000439453 MILR1Q7Z6M3 343 aa8.27□□□□□ -1.08
HPS4-206ENST00000439453 SLC38A6Q8IZM9 456 aa8.27□□□□□ -1.08
HPS4-206ENST00000439453 SPERTQ8NA61 448 aa8.27□□□□□ -1.08
HPS4-206ENST00000439453 ATAD1Q8NBU5 361 aa8.27□□□□□ -1.08
HPS4-206ENST00000439453 CLHC1Q8NHS4 586 aa8.27□□□□□ -1.08
HPS4-206ENST00000439453 RIPOR3Q96MK2 946 aa8.27□□□□□ -1.08
HPS4-206ENST00000439453 TRNT1Q96Q11 434 aaKnown RBP8.27□□□□□ -1.08
HPS4-206ENST00000439453 RANGRFQ9HD47 186 aaPredicted RBP8.27□□□□□ -1.08
HPS4-206ENST00000439453 ACOXLQ9NUZ1 547 aa8.27□□□□□ -1.08
HPS4-206ENST00000439453 FKBP14Q9NWM8 211 aa8.27□□□□□ -1.08
HPS4-206ENST00000439453 NUDT4Q9NZJ9 180 aa8.27□□□□□ -1.08
HPS4-206ENST00000439453 RIMKLBQ9ULI2 386 aa8.27□□□□□ -1.08
HPS4-206ENST00000439453 SLC12A8A0AV02 714 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 CLCA1A8K7I4 914 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 STSP08842 583 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 IL7P13232 177 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 PKMP14618 531 aaKnown RBP8.27□□□□□ -1.09
HPS4-206ENST00000439453 PIK3CGP48736 1102 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 PGFP49763 221 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 CRISP3P54108 245 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 MLLT6P55198 1093 aaPredicted RBP8.27□□□□□ -1.09
HPS4-206ENST00000439453 VLDLRP98155 873 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 ABHD18Q0P651 414 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 SLAMF1Q13291 335 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 PCBP2Q15366 365 aaKnown RBP eCLIP8.27□□□□□ -1.09
HPS4-206ENST00000439453 SLC39A12Q504Y0 691 aa8.27□□□□□ -1.09
HPS4-206ENST00000439453 PIK3R6Q5UE93 754 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms