RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 AHRP35869 848 aa23.47■■□□□ 1.35
RAPGEF1-206ENST00000438647 SKP1P63208 163 aa23.47■■□□□ 1.35
RAPGEF1-206ENST00000438647 REEP5Q00765 189 aa23.47■■□□□ 1.35
RAPGEF1-206ENST00000438647 RGS1Q08116 209 aa23.47■■□□□ 1.35
RAPGEF1-206ENST00000438647 AIMP2Q13155 320 aaKnown RBP23.47■■□□□ 1.35
RAPGEF1-206ENST00000438647 OR4D1Q15615 310 aa23.47■■□□□ 1.35
RAPGEF1-206ENST00000438647 MROH9Q5TGP6 573 aa23.47■■□□□ 1.35
RAPGEF1-206ENST00000438647 TMEM151BQ8IW70 566 aa23.47■■□□□ 1.35
RAPGEF1-206ENST00000438647 PRSS58Q8IYP2 241 aa23.47■■□□□ 1.35
RAPGEF1-206ENST00000438647 GALNT16Q8N428 558 aa23.47■■□□□ 1.35
RAPGEF1-206ENST00000438647 OR9A4Q8NGU2 314 aa23.47■■□□□ 1.35
RAPGEF1-206ENST00000438647 CD274Q9NZQ7 290 aa23.47■■□□□ 1.35
RAPGEF1-206ENST00000438647 ZFP69BQ9UJL9 534 aa23.47■■□□□ 1.35
RAPGEF1-206ENST00000438647 FBXL4Q9UKA2 621 aa23.47■■□□□ 1.35
RAPGEF1-206ENST00000438647 ACOT9Q9Y305 439 aa23.47■■□□□ 1.35
RAPGEF1-206ENST00000438647 SLC22A7Q9Y694 548 aa23.47■■□□□ 1.35
RAPGEF1-206ENST00000438647 A0A087X1B8 175 aa23.46■■□□□ 1.35
RAPGEF1-206ENST00000438647 ALPPP05187 535 aa23.46■■□□□ 1.35
RAPGEF1-206ENST00000438647 LTA4HP09960 611 aaKnown RBP23.46■■□□□ 1.35
RAPGEF1-206ENST00000438647 GGT5P36269 586 aa23.46■■□□□ 1.35
RAPGEF1-206ENST00000438647 CASRP41180 1078 aa23.46■■□□□ 1.35
RAPGEF1-206ENST00000438647 SCTRP47872 440 aa23.46■■□□□ 1.35
RAPGEF1-206ENST00000438647 HERC3Q15034 1050 aa23.46■■□□□ 1.35
RAPGEF1-206ENST00000438647 TUBB8Q3ZCM7 444 aa23.46■■□□□ 1.35
RAPGEF1-206ENST00000438647 KIRREL2Q6UWL6 708 aa23.46■■□□□ 1.35
RAPGEF1-206ENST00000438647 IFT20Q8IY31 132 aa23.46■■□□□ 1.35
RAPGEF1-206ENST00000438647 KCT2Q8NC54 265 aa23.46■■□□□ 1.35
RAPGEF1-206ENST00000438647 PDPRQ8NCN5 879 aa23.46■■□□□ 1.35
RAPGEF1-206ENST00000438647 ZCCHC10Q8TBK6 192 aa23.46■■□□□ 1.35
RAPGEF1-206ENST00000438647 MACROD1Q9BQ69 325 aa23.46■■□□□ 1.35
RAPGEF1-206ENST00000438647 GPRC5BQ9NZH0 403 aa23.46■■□□□ 1.35
RAPGEF1-206ENST00000438647 MRPS2Q9Y399 296 aaKnown RBP23.46■■□□□ 1.35
RAPGEF1-206ENST00000438647 IKBKGQ9Y6K9 419 aa23.46■■□□□ 1.35
RAPGEF1-206ENST00000438647 CCDC189A1A4V9 331 aa23.45■■□□□ 1.34
RAPGEF1-206ENST00000438647 IDSB3KWA1 339 aa23.45■■□□□ 1.34
RAPGEF1-206ENST00000438647 MAP2K7O14733 419 aa23.45■■□□□ 1.34
RAPGEF1-206ENST00000438647 PDGFAP04085 211 aa23.45■■□□□ 1.34
RAPGEF1-206ENST00000438647 INHBAP08476 426 aa23.45■■□□□ 1.34
RAPGEF1-206ENST00000438647 ACPPP15309 386 aa23.45■■□□□ 1.34
RAPGEF1-206ENST00000438647 IL1RNP18510 177 aa23.45■■□□□ 1.34
RAPGEF1-206ENST00000438647 TFEBP19484 476 aa23.45■■□□□ 1.34
RAPGEF1-206ENST00000438647 GDF5P43026 501 aa23.45■■□□□ 1.34
RAPGEF1-206ENST00000438647 EMP2P54851 167 aa23.45■■□□□ 1.34
RAPGEF1-206ENST00000438647 SOX8P57073 446 aa23.45■■□□□ 1.34
RAPGEF1-206ENST00000438647 CDC16Q13042 620 aa23.45■■□□□ 1.34
RAPGEF1-206ENST00000438647 MYBPC3Q14896 1274 aa23.45■■□□□ 1.34
RAPGEF1-206ENST00000438647 VWA5B1Q5TIE3 1220 aa23.45■■□□□ 1.34
RAPGEF1-206ENST00000438647 NIPAL1Q6NVV3 410 aa23.45■■□□□ 1.34
RAPGEF1-206ENST00000438647 ZNF740Q8NDX6 193 aa23.45■■□□□ 1.34
RAPGEF1-206ENST00000438647 TRPV3Q8NET8 790 aa23.45■■□□□ 1.34
RAPGEF1-206ENST00000438647 SMAD5Q99717 465 aaKnown RBP23.45■■□□□ 1.34
RAPGEF1-206ENST00000438647 NUDT9Q9BW91 350 aa23.45■■□□□ 1.34
RAPGEF1-206ENST00000438647 ALG9Q9H6U8 611 aa23.45■■□□□ 1.34
RAPGEF1-206ENST00000438647 DNAJC11Q9NVH1 559 aa23.45■■□□□ 1.34
RAPGEF1-206ENST00000438647 PCSK5Q92824 1860 aa23.45■■□□□ 1.34
RAPGEF1-206ENST00000438647 URADA6NGE7 173 aa23.44■■□□□ 1.34
RAPGEF1-206ENST00000438647 H2AFYO75367 372 aaKnown RBP23.44■■□□□ 1.34
RAPGEF1-206ENST00000438647 STK16O75716 305 aa23.44■■□□□ 1.34
RAPGEF1-206ENST00000438647 SERPIND1P05546 499 aa23.44■■□□□ 1.34
RAPGEF1-206ENST00000438647 HEXBP07686 556 aa23.44■■□□□ 1.34
RAPGEF1-206ENST00000438647 SERPINB8P50452 374 aa23.44■■□□□ 1.34
RAPGEF1-206ENST00000438647 BMPR2Q13873 1038 aa23.44■■□□□ 1.34
RAPGEF1-206ENST00000438647 FAM83EQ2M2I3 478 aa23.44■■□□□ 1.34
RAPGEF1-206ENST00000438647 C18orf21Q32NC0 220 aaPredicted RBP23.44■■□□□ 1.34
RAPGEF1-206ENST00000438647 IRAK1BP1Q5VVH5 260 aa23.44■■□□□ 1.34
RAPGEF1-206ENST00000438647 TAOK1Q7L7X3 1001 aa23.44■■□□□ 1.34
RAPGEF1-206ENST00000438647 ISCA2Q86U28 154 aa23.44■■□□□ 1.34
RAPGEF1-206ENST00000438647 OR11G2Q8NGC1 345 aa23.44■■□□□ 1.34
RAPGEF1-206ENST00000438647 NT5CQ8TCD5 201 aa23.44■■□□□ 1.34
RAPGEF1-206ENST00000438647 SLC44A1Q8WWI5 657 aa23.44■■□□□ 1.34
RAPGEF1-206ENST00000438647 TMEM79Q9BSE2 394 aa23.44■■□□□ 1.34
RAPGEF1-206ENST00000438647 SPNS1Q9H2V7 528 aa23.44■■□□□ 1.34
RAPGEF1-206ENST00000438647 SNX15Q9NRS6 342 aa23.44■■□□□ 1.34
RAPGEF1-206ENST00000438647 NUDT4Q9NZJ9 180 aa23.44■■□□□ 1.34
RAPGEF1-206ENST00000438647 C5AR2Q9P296 337 aa23.44■■□□□ 1.34
RAPGEF1-206ENST00000438647 HELZ2Q9BYK8 2649 aaKnown RBP23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 FFAR3O14843 346 aa23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 GPR42O15529 346 aa23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 TAPBPO15533 448 aa23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 DPM1O60762 260 aa23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 KERAO60938 352 aa23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 C2P06681 752 aa23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 CYC1P08574 325 aa23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 C1GALT1C1LP0DN25 315 aa23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 TYK2P29597 1187 aa23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 HSPA7P48741 367 aa23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 MAT1AQ00266 395 aaKnown RBP23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 RBBP5Q15291 538 aaKnown RBP23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 SYT16Q17RD7 645 aa23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 ATG9BQ674R7 924 aa23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 ABHD13Q7L211 337 aa23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 PRSS41Q7RTY9 318 aa23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 LAPTM4BQ86VI4 370 aa23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 ZC3H7AQ8IWR0 971 aaKnown RBP23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 TTLQ8NG68 377 aa23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 EXT2Q93063 718 aa23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 PITHD1Q9GZP4 211 aaPredicted RBP23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 IGSF5Q9NSI5 407 aa23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 PTBP2Q9UKA9 531 aaKnown RBP23.43■■□□□ 1.34
RAPGEF1-206ENST00000438647 SYCE1LA8MT33 242 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms