RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 TRAP1Q12931 704 aaKnown RBP20.26■□□□□ 0.83
PTPRF-207ENST00000436724 SFTPA2Q8IWL1 248 aa20.26■□□□□ 0.83
PTPRF-207ENST00000436724 OR4E2Q8NGC2 313 aa20.26■□□□□ 0.83
PTPRF-207ENST00000436724 UBE2E3Q969T4 207 aa20.26■□□□□ 0.83
PTPRF-207ENST00000436724 AIF1LQ9BQI0 150 aa20.26■□□□□ 0.83
PTPRF-207ENST00000436724 IKZF5Q9H5V7 419 aa20.26■□□□□ 0.83
PTPRF-207ENST00000436724 PELI2Q9HAT8 420 aa20.26■□□□□ 0.83
PTPRF-207ENST00000436724 BCAP29Q9UHQ4 241 aa20.26■□□□□ 0.83
PTPRF-207ENST00000436724 COLEC10Q9Y6Z7 277 aa20.26■□□□□ 0.83
PTPRF-207ENST00000436724 A0A1W2PPC4 97 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 A6NCN8 305 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 STK25O00506 426 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 GSNP06396 782 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 CELA2BP08218 269 aaPredicted RBP20.25■□□□□ 0.83
PTPRF-207ENST00000436724 SLC19A1P41440 591 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 DHFR2Q86XF0 187 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 PATE1Q8WXA2 126 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 METTL2AQ96IZ6 378 aaKnown RBP20.25■□□□□ 0.83
PTPRF-207ENST00000436724 SLC6A18Q96N87 628 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 TRAPPC9Q96Q05 1148 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 TSC22D3Q99576 134 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 REXO4Q9GZR2 422 aaKnown RBP20.25■□□□□ 0.83
PTPRF-207ENST00000436724 TRNAU1APQ9NX07 287 aaKnown RBP20.25■□□□□ 0.83
PTPRF-207ENST00000436724 PCOLCE2Q9UKZ9 415 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 PLXND1Q9Y4D7 1925 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 LCMT2O60294 686 aaKnown RBP20.25■□□□□ 0.83
PTPRF-207ENST00000436724 ZNF217O75362 1048 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 COX7A2P14406 83 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 CDKN2CP42773 168 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 CSNK1G2P78368 415 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 EIF2B5Q13144 721 aaKnown RBP20.25■□□□□ 0.83
PTPRF-207ENST00000436724 GRAMD1BQ3KR37 738 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 C10orf62Q5T681 223 aaPredicted RBP20.25■□□□□ 0.83
PTPRF-207ENST00000436724 WASH2PQ6VEQ5 465 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 GPR180Q86V85 440 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 FBXL6Q8N531 539 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 OR4K1Q8NGD4 311 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 AURKBQ96GD4 344 aaPredicted RBP20.25■□□□□ 0.83
PTPRF-207ENST00000436724 SHDQ96IW2 340 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 KCTD14Q9BQ13 255 aaPredicted RBP20.25■□□□□ 0.83
PTPRF-207ENST00000436724 RAB11FIP5Q9BXF6 653 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 DMTF1Q9Y222 760 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 DTNAQ9Y4J8 743 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 PCDHB11Q9Y5F2 797 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 HEBP2Q9Y5Z4 205 aa20.25■□□□□ 0.83
PTPRF-207ENST00000436724 TDRD6O60522 2096 aaKnown RBP20.25■□□□□ 0.83
PTPRF-207ENST00000436724 ANKDD1BA6NHY2 528 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 F3P13726 295 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 NCK1P16333 377 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 EFNA1P20827 205 aaPredicted RBP20.24■□□□□ 0.83
PTPRF-207ENST00000436724 GRIA3P42263 894 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 KIR3DL1P43629 444 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 GALNT18Q6P9A2 607 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 LCN9Q8WX39 176 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 BTBD9Q96Q07 612 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 PAIP1Q9H074 479 aaKnown RBP20.24■□□□□ 0.83
PTPRF-207ENST00000436724 KIR3DX1Q9H7L2 352 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 AASDHPPTQ9NRN7 309 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.24■□□□□ 0.83
PTPRF-207ENST00000436724 KLHL20Q9Y2M5 609 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 PCDHB14Q9Y5E9 798 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 DGKBQ9Y6T7 804 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 SPTY2D1-AS1A0A0U1RR47 76 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 YY2O15391 372 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 OR1F1O43749 312 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 PRICKLE3O43900 615 aaPredicted RBP20.24■□□□□ 0.83
PTPRF-207ENST00000436724 FESP07332 822 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 HOXB3P14651 431 aaPredicted RBP20.24■□□□□ 0.83
PTPRF-207ENST00000436724 REEP5Q00765 189 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 FOLH1Q04609 750 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 FZD2Q14332 565 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 PUS10Q3MIT2 529 aaKnown RBP20.24■□□□□ 0.83
PTPRF-207ENST00000436724 SPPL2CQ8IUH8 684 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 ICA1LQ8NDH6 482 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 CXorf40BQ96DE9 158 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 TBC1D17Q9HA65 648 aa20.24■□□□□ 0.83
PTPRF-207ENST00000436724 C15orf38-AP3S2A0A0A6YYH1 394 aa20.23■□□□□ 0.83
PTPRF-207ENST00000436724 GABRR3A8MPY1 467 aa20.23■□□□□ 0.83
PTPRF-207ENST00000436724 KLHL18O94889 574 aa20.23■□□□□ 0.83
PTPRF-207ENST00000436724 TNFP01375 233 aa20.23■□□□□ 0.83
PTPRF-207ENST00000436724 KLK1P06870 262 aa20.23■□□□□ 0.83
PTPRF-207ENST00000436724 LAMP1P11279 417 aa20.23■□□□□ 0.83
PTPRF-207ENST00000436724 WNT3P56703 355 aa20.23■□□□□ 0.83
PTPRF-207ENST00000436724 OR4D2P58180 307 aa20.23■□□□□ 0.83
PTPRF-207ENST00000436724 RHDQ02161 417 aa20.23■□□□□ 0.83
PTPRF-207ENST00000436724 ILF3Q12906 894 aaKnown RBP eCLIP20.23■□□□□ 0.83
PTPRF-207ENST00000436724 MTAPQ13126 283 aa20.23■□□□□ 0.83
PTPRF-207ENST00000436724 ZFP1Q6P2D0 407 aa20.23■□□□□ 0.83
PTPRF-207ENST00000436724 ARPINQ7Z6K5 226 aa20.23■□□□□ 0.83
PTPRF-207ENST00000436724 AMIGO1Q86WK6 493 aa20.23■□□□□ 0.83
PTPRF-207ENST00000436724 LILRA2Q8N149 483 aa20.23■□□□□ 0.83
PTPRF-207ENST00000436724 GBP5Q96PP8 586 aa20.23■□□□□ 0.83
PTPRF-207ENST00000436724 F2RL3Q96RI0 385 aa20.23■□□□□ 0.83
PTPRF-207ENST00000436724 RHBGQ9H310 441 aa20.23■□□□□ 0.83
PTPRF-207ENST00000436724 SLC6A20Q9NP91 592 aa20.23■□□□□ 0.83
PTPRF-207ENST00000436724 RIMS3Q9UJD0 308 aa20.23■□□□□ 0.83
PTPRF-207ENST00000436724 EXO1Q9UQ84 846 aaKnown RBP20.23■□□□□ 0.83
PTPRF-207ENST00000436724 ERVK-11Q9UQG0 969 aa20.23■□□□□ 0.83
PTPRF-207ENST00000436724 TSC22D4Q9Y3Q8 395 aa20.23■□□□□ 0.83
PTPRF-207ENST00000436724 ARHGAP10A1A4S6 786 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms