RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 VN1R2Q8NFZ6 395 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 ZFP90Q8TF47 636 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 ZNF480Q8WV37 535 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 NODALQ96S42 347 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 WRAP53Q9BUR4 548 aaKnown RBP17.91■□□□□ 0.46
CLK1-205ENST00000434813 ZCCHC2Q9C0B9 1178 aaKnown RBP17.91■□□□□ 0.46
CLK1-205ENST00000434813 FZD4Q9ULV1 537 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 MGAT4DA6NG13 374 aa17.9■□□□□ 0.46
CLK1-205ENST00000434813 MYO1GB0I1T2 1018 aa17.9■□□□□ 0.46
CLK1-205ENST00000434813 KPNA3O00505 521 aaPredicted RBP17.9■□□□□ 0.46
CLK1-205ENST00000434813 RNASET2O00584 256 aaKnown RBP17.9■□□□□ 0.46
CLK1-205ENST00000434813 PCMT1P22061 227 aa17.9■□□□□ 0.46
CLK1-205ENST00000434813 RPS13P62277 151 aaKnown RBP17.9■□□□□ 0.46
CLK1-205ENST00000434813 IL5RAQ01344 420 aa17.9■□□□□ 0.46
CLK1-205ENST00000434813 LAPTM4AQ15012 233 aa17.9■□□□□ 0.46
CLK1-205ENST00000434813 PDE12Q6L8Q7 609 aaKnown RBP17.9■□□□□ 0.46
CLK1-205ENST00000434813 KLHL35Q6PF15 583 aa17.9■□□□□ 0.46
CLK1-205ENST00000434813 LZICQ8WZA0 190 aa17.9■□□□□ 0.46
CLK1-205ENST00000434813 RIBC2Q9H4K1 309 aa17.9■□□□□ 0.46
CLK1-205ENST00000434813 EXD2Q9NVH0 621 aa17.9■□□□□ 0.46
CLK1-205ENST00000434813 SIRT5Q9NXA8 310 aa17.9■□□□□ 0.46
CLK1-205ENST00000434813 ZNF282Q9UDV7 671 aaPredicted RBP17.9■□□□□ 0.46
CLK1-205ENST00000434813 SAMHD1Q9Y3Z3 626 aaKnown RBP17.9■□□□□ 0.46
CLK1-205ENST00000434813 GRXCR1A8MXD5 290 aa17.89■□□□□ 0.46
CLK1-205ENST00000434813 PCDH7O60245 1069 aa17.89■□□□□ 0.46
CLK1-205ENST00000434813 LILRB5O75023 590 aa17.89■□□□□ 0.46
CLK1-205ENST00000434813 JRKO75564 520 aa17.89■□□□□ 0.46
CLK1-205ENST00000434813 FKBP9O95302 570 aa17.89■□□□□ 0.46
CLK1-205ENST00000434813 ANGPTL1O95841 491 aa17.89■□□□□ 0.46
CLK1-205ENST00000434813 ADH5P11766 374 aa17.89■□□□□ 0.46
CLK1-205ENST00000434813 CEBPBP17676 345 aa17.89■□□□□ 0.46
CLK1-205ENST00000434813 PCGF2P35227 344 aa17.89■□□□□ 0.46
CLK1-205ENST00000434813 CCR3P51677 355 aa17.89■□□□□ 0.46
CLK1-205ENST00000434813 ST8SIA6P61647 398 aa17.89■□□□□ 0.46
CLK1-205ENST00000434813 RGNQ15493 299 aa17.89■□□□□ 0.46
CLK1-205ENST00000434813 ZNF697Q5TEC3 545 aa17.89■□□□□ 0.46
CLK1-205ENST00000434813 GPR156Q8NFN8 814 aa17.89■□□□□ 0.46
CLK1-205ENST00000434813 CNIH3Q8TBE1 160 aa17.89■□□□□ 0.46
CLK1-205ENST00000434813 FNDC8Q8TC99 324 aa17.89■□□□□ 0.46
CLK1-205ENST00000434813 TANKQ92844 425 aa17.89■□□□□ 0.46
CLK1-205ENST00000434813 EFCAB11Q9BUY7 163 aa17.89■□□□□ 0.46
CLK1-205ENST00000434813 PREBQ9HCU5 417 aa17.89■□□□□ 0.46
CLK1-205ENST00000434813 ATP6V1HQ9UI12 483 aa17.89■□□□□ 0.46
CLK1-205ENST00000434813 PSME2Q9UL46 239 aa17.89■□□□□ 0.46
CLK1-205ENST00000434813 VPS4AQ9UN37 437 aa17.89■□□□□ 0.46
CLK1-205ENST00000434813 PCDHGB1Q9Y5G3 927 aa17.89■□□□□ 0.46
CLK1-205ENST00000434813 LAMA3Q16787 3333 aa17.89■□□□□ 0.45
CLK1-205ENST00000434813 KIAA1549LQ6ZVL6 1849 aa17.89■□□□□ 0.45
CLK1-205ENST00000434813 GNG14A0A1W2PPG7 69 aa17.89■□□□□ 0.45
CLK1-205ENST00000434813 HOXC11O43248 304 aaPredicted RBP17.89■□□□□ 0.45
CLK1-205ENST00000434813 SH3BGRLO75368 114 aa17.89■□□□□ 0.45
CLK1-205ENST00000434813 PRNPP04156 253 aa17.89■□□□□ 0.45
CLK1-205ENST00000434813 INHBBP09529 407 aa17.89■□□□□ 0.45
CLK1-205ENST00000434813 ZNF182P17025 639 aaPredicted RBP17.89■□□□□ 0.45
CLK1-205ENST00000434813 EFNA1P20827 205 aaPredicted RBP17.89■□□□□ 0.45
CLK1-205ENST00000434813 CLK3P49761 638 aaKnown RBP17.89■□□□□ 0.45
CLK1-205ENST00000434813 CRYBA2P53672 197 aa17.89■□□□□ 0.45
CLK1-205ENST00000434813 MAPK10P53779 464 aa17.89■□□□□ 0.45
CLK1-205ENST00000434813 PIGFQ07326 219 aa17.89■□□□□ 0.45
CLK1-205ENST00000434813 ZNF763Q0D2J5 394 aa17.89■□□□□ 0.45
CLK1-205ENST00000434813 IQCCQ4KMZ1 466 aa17.89■□□□□ 0.45
CLK1-205ENST00000434813 ZNF765Q7L2R6 523 aa17.89■□□□□ 0.45
CLK1-205ENST00000434813 GRASPQ7Z6J2 395 aaPredicted RBP17.89■□□□□ 0.45
CLK1-205ENST00000434813 ZC3H7AQ8IWR0 971 aaKnown RBP17.89■□□□□ 0.45
CLK1-205ENST00000434813 SYTL1Q8IYJ3 562 aa17.89■□□□□ 0.45
CLK1-205ENST00000434813 FKBP10Q96AY3 582 aa17.89■□□□□ 0.45
CLK1-205ENST00000434813 SAMD11Q96NU1 681 aa17.89■□□□□ 0.45
CLK1-205ENST00000434813 SGPP1Q9BX95 441 aa17.89■□□□□ 0.45
CLK1-205ENST00000434813 BHLHE41Q9C0J9 482 aaPredicted RBP17.89■□□□□ 0.45
CLK1-205ENST00000434813 REEP1Q9H902 201 aa17.89■□□□□ 0.45
CLK1-205ENST00000434813 PDP1Q9P0J1 537 aaPredicted RBP17.89■□□□□ 0.45
CLK1-205ENST00000434813 SLC27A6Q9Y2P4 619 aa17.89■□□□□ 0.45
CLK1-205ENST00000434813 PRRC2BQ5JSZ5 2229 aaKnown RBP17.88■□□□□ 0.45
CLK1-205ENST00000434813 SH3PXD2BA1X283 911 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 FOXE1O00358 373 aaPredicted RBP17.88■□□□□ 0.45
CLK1-205ENST00000434813 DIRAS1O95057 198 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 NUDT7P0C024 238 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 JUNDP17535 347 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 CXCR4P61073 352 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 BNIP3Q12983 259 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 TCEAL5Q5H9L2 206 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 FAHD1Q6P587 224 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 B3GNT8Q7Z7M8 397 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 C12orf40Q86WS4 652 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 LAS2Q8IYD9 372 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 ING5Q8WYH8 240 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 C7orf34Q96L11 122 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 EHD1Q9H4M9 534 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 THUMPD1Q9NXG2 353 aaKnown RBP17.88■□□□□ 0.45
CLK1-205ENST00000434813 EXO1Q9UQ84 846 aaKnown RBP17.88■□□□□ 0.45
CLK1-205ENST00000434813 DYRK1BQ9Y463 629 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 CHD9Q3L8U1 2897 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 ZNF197O14709 1029 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 CYP4B1P13584 511 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 NPPBP16860 134 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 ITGB7P26010 798 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 GPM6BQ13491 265 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 SIM2Q14190 667 aaPredicted RBP17.88■□□□□ 0.45
CLK1-205ENST00000434813 SLBPQ14493 270 aaKnown RBP eCLIP17.88■□□□□ 0.45
CLK1-205ENST00000434813 TEAD4Q15561 434 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms