RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 ACTL8Q9H568 366 aa14.79□□□□□ -0.04
TREX1-201ENST00000433541 IPPKQ9H8X2 491 aa14.79□□□□□ -0.04
TREX1-201ENST00000433541 ZNF304Q9HCX3 659 aa14.79□□□□□ -0.04
TREX1-201ENST00000433541 GEMIN8Q9NWZ8 242 aaKnown RBP14.79□□□□□ -0.04
TREX1-201ENST00000433541 CELSR3Q9NYQ7 3312 aa14.79□□□□□ -0.04
TREX1-201ENST00000433541 IL17BQ9UHF5 180 aa14.79□□□□□ -0.04
TREX1-201ENST00000433541 ZFP69BQ9UJL9 534 aa14.79□□□□□ -0.04
TREX1-201ENST00000433541 GRID1Q9ULK0 1009 aa14.79□□□□□ -0.04
TREX1-201ENST00000433541 FARSAQ9Y285 508 aaKnown RBP14.79□□□□□ -0.04
TREX1-201ENST00000433541 PTPRQQ9UMZ3 2332 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 SCN2AQ99250 2005 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 KCNE1BA0A087WTH5 132 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 A0A0A6YYC8 382 aaPredicted RBP14.78□□□□□ -0.04
TREX1-201ENST00000433541 URADA6NGE7 173 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 A8MT66 165 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 STX16-NPEPL1H3BU86 382 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 I3L1I5 382 aaPredicted RBP14.78□□□□□ -0.04
TREX1-201ENST00000433541 STX16O14662 325 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 MYZAPP0CAP1 466 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 MYL2P10916 166 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 PTPN4P29074 926 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 AHRP35869 848 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 SCTRP47872 440 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 CCNG1P51959 295 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 MC1RQ01726 317 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 ERV3-1Q14264 604 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 PCBP2Q15366 365 aaKnown RBP eCLIP14.78□□□□□ -0.04
TREX1-201ENST00000433541 CCDC153Q494R4 210 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 LCN10Q6JVE6 187 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 VN1R4Q7Z5H5 301 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.78□□□□□ -0.04
TREX1-201ENST00000433541 DTWD1Q8N5C7 304 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 KCT2Q8NC54 265 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.78□□□□□ -0.04
TREX1-201ENST00000433541 CRELD1Q96HD1 420 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 SLC45A3Q96JT2 553 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 C10orf90Q96M02 699 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 ZIM3Q96PE6 472 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 GPR87Q9BY21 358 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 EHD1Q9H4M9 534 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 SYNPO2LQ9H987 977 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 ANKHQ9HCJ1 492 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 ARGLU1Q9NWB6 273 aaPredicted RBP14.78□□□□□ -0.04
TREX1-201ENST00000433541 LGALS13Q9UHV8 139 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 CACNA1BQ00975 2339 aa14.78□□□□□ -0.04
TREX1-201ENST00000433541 PKD1L2Q7Z442 2459 aa14.77□□□□□ -0.04
TREX1-201ENST00000433541 CDC14CA4D256 554 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 GOLGA6L10A6NI86 522 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 K7ENP7 123 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 KLK8O60259 260 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 SUPT7LO94864 414 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 CD63P08962 238 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 IL1RNP18510 177 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 F8A1P23610 371 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 ATP5F1P24539 256 aaPredicted RBP14.77□□□□□ -0.05
TREX1-201ENST00000433541 FOLR3P41439 243 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 SKP1P63208 163 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 OCA2Q04671 838 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 ZNF844Q08AG5 666 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 DDX39BQ13838 428 aaKnown RBP14.77□□□□□ -0.05
TREX1-201ENST00000433541 NCF4Q15080 339 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 TOR1AIP1Q5JTV8 583 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 TTC19Q6DKK2 380 aaPredicted RBP14.77□□□□□ -0.05
TREX1-201ENST00000433541 PRMT9Q6P2P2 845 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 INO80CQ6PI98 192 aaPredicted RBP14.77□□□□□ -0.05
TREX1-201ENST00000433541 FAM198BQ6UWH4 519 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 ABHD13Q7L211 337 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 GPR155Q7Z3F1 870 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 CROCCP2Q86T23 111 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 TRABD2AQ86V40 505 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 SLC22A9Q8IVM8 553 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 UBE2E3Q969T4 207 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 APOPT1Q96IL0 206 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 NOL11Q9H8H0 719 aaKnown RBP14.77□□□□□ -0.05
TREX1-201ENST00000433541 SEMA4BQ9NPR2 832 aaPredicted RBP14.77□□□□□ -0.05
TREX1-201ENST00000433541 MID2Q9UJV3 735 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 PTRH2Q9Y3E5 179 aaKnown RBP14.77□□□□□ -0.05
TREX1-201ENST00000433541 ZZEF1O43149 2961 aa14.77□□□□□ -0.05
TREX1-201ENST00000433541 E2F3O00716 465 aa14.76□□□□□ -0.05
TREX1-201ENST00000433541 SPAG7O75391 227 aa14.76□□□□□ -0.05
TREX1-201ENST00000433541 CREG1O75629 220 aa14.76□□□□□ -0.05
TREX1-201ENST00000433541 RAB40ALP0C0E4 278 aa14.76□□□□□ -0.05
TREX1-201ENST00000433541 ZNF888P0CJ79 500 aaPredicted RBP14.76□□□□□ -0.05
TREX1-201ENST00000433541 WT1P19544 449 aaPredicted RBP14.76□□□□□ -0.05
TREX1-201ENST00000433541 HPDP32754 393 aaPredicted RBP14.76□□□□□ -0.05
TREX1-201ENST00000433541 CRHR1P34998 444 aa14.76□□□□□ -0.05
TREX1-201ENST00000433541 EMP3P54852 163 aa14.76□□□□□ -0.05
TREX1-201ENST00000433541 STXBP1P61764 594 aaKnown RBP14.76□□□□□ -0.05
TREX1-201ENST00000433541 PHEXP78562 749 aa14.76□□□□□ -0.05
TREX1-201ENST00000433541 PWP1Q13610 501 aa14.76□□□□□ -0.05
TREX1-201ENST00000433541 MFSD4BQ5TF39 518 aa14.76□□□□□ -0.05
TREX1-201ENST00000433541 METTL2BQ6P1Q9 378 aaKnown RBP14.76□□□□□ -0.05
TREX1-201ENST00000433541 MED27Q6P2C8 311 aa14.76□□□□□ -0.05
TREX1-201ENST00000433541 PRSS58Q8IYP2 241 aa14.76□□□□□ -0.05
TREX1-201ENST00000433541 CCNYL1Q8N7R7 359 aa14.76□□□□□ -0.05
TREX1-201ENST00000433541 ANKRD53Q8N9V6 530 aa14.76□□□□□ -0.05
TREX1-201ENST00000433541 OR9A4Q8NGU2 314 aa14.76□□□□□ -0.05
TREX1-201ENST00000433541 CCDC126Q96EE4 140 aa14.76□□□□□ -0.05
TREX1-201ENST00000433541 MOCOSQ96EN8 888 aa14.76□□□□□ -0.05
TREX1-201ENST00000433541 MVB12AQ96EY5 273 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms