RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 CHKBQ9Y259 395 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 SPAG9O60271 1321 aaKnown RBP2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 CARMIL1Q5VZK9 1371 aa2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 DHX29Q7Z478 1369 aaKnown RBP2.82□□□□□ -1.96
HMGB1P27-201ENST00000431429 DENND3A2RUS2 1198 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 FAM172BPA6NC97 362 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 BUB3O43684 328 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 ZBTB14O43829 449 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 ACSL4O60488 711 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 CDK2AP2O75956 126 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 ATP1B1P05026 303 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 STAG3L1P0CL83 205 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 ALDH4A1P30038 563 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 ALDH1B1P30837 517 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 CEACAM8P31997 349 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 SERPINB6P35237 376 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 SERPINH1P50454 418 aaKnown RBP2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 DVL1P1P54792 670 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 CLDN17P56750 224 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 BPIFB3P59826 476 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 ARF5P84085 180 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 MSLNQ13421 630 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 TAF13Q15543 124 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 PARP10Q53GL7 1025 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 C9orf50Q5SZB4 431 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 PM20D1Q6GTS8 502 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 FUT10Q6P4F1 479 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 RBMS3Q6XE24 437 aaKnown RBP2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 LEKR1Q6ZMV7 388 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 ASPGQ86U10 573 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 ZSCAN30Q86W11 494 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 DNAJC22Q8N4W6 341 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 DYRK2Q92630 601 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 ATP6V0A1Q93050 837 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 LMLNQ96KR4 655 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 C10orf90Q96M02 699 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 PRAM1Q96QH2 718 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 C17orf62Q9BQA9 187 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 ZNF559Q9BR84 538 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 ALKBH7Q9BT30 221 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 RIMS4Q9H426 269 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 ZNF71Q9NQZ8 489 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 FAM118AQ9NWS6 357 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 COMMD8Q9NX08 183 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 TRPC4Q9UBN4 977 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 IL36AQ9UHA7 158 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 MAD2L2Q9UI95 211 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 PILRBQ9UKJ0 227 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 FAF1Q9UNN5 650 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 FOXA2Q9Y261 457 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 KIF27Q86VH2 1401 aa2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 DENND4BO75064 1496 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 PPRC1Q5VV67 1664 aaKnown RBP2.81□□□□□ -1.96
HMGB1P27-201ENST00000431429 CFAP43Q8NDM7 1665 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 KIF21BO75037 1637 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 LTBP4Q8N2S1 1624 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 MED1Q15648 1581 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 FHOD3Q2V2M9 1422 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 IGKV2D-30A0A075B6S6 120 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 SLC9B1P1A6NJY1 282 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 H3BMM5 538 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 RAD51DO75771 328 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 CXCL14O95715 111 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 CLPTM1O96005 669 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 RAF1P04049 648 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 UMODP07911 640 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 YES1P07947 543 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 SP9P0CG40 484 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 FAM157CP0CG43 387 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 DARSP14868 501 aaKnown RBP2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 RBMS1P29558 406 aaKnown RBP2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 OR3A3P47888 321 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 CLCN4P51793 760 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 SLC12A3P55017 1021 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 RPP38P78345 283 aaKnown RBP2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 AKAP17AQ02040 695 aaKnown RBP2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 TRA2AQ13595 282 aaKnown RBP eCLIP2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 SQLEQ14534 574 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 OPCMLQ14982 345 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 RBBP5Q15291 538 aaKnown RBP2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 KIAA1644Q3SXP7 199 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 FAM76BQ5HYJ3 339 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 LRRC38Q5VT99 294 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 TTC27Q6P3X3 843 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 CTR9Q6PD62 1173 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 SLC25A47Q6Q0C1 308 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 SIGLEC15Q6ZMC9 328 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 C1orf186Q6ZWK4 172 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 G2E3Q7L622 706 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 COX8CQ7Z4L0 72 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 ZNF410Q86VK4 478 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 APLFQ8IW19 511 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 LAX1Q8IWV1 398 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 CDK20Q8IZL9 346 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 TMEM99Q8N816 258 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 OR2T11Q8NH01 316 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 OR4C3Q8NH37 302 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 CD99L2Q8TCZ2 262 aa2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 UBLCP1Q8WVY7 318 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P27-201ENST00000431429 TM9SF4Q92544 642 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms