RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 GPNMBQ14956 572 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 STXBP2Q15833 593 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 CLPPQ16740 277 aaPredicted RBP3.89□□□□□ -1.79
HMGB3-203ENST00000430118 ZNF528Q3MIS6 628 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 FSCBQ5H9T9 825 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 KCNT1Q5JUK3 1230 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 MANEAQ5SRI9 462 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 GCNT6Q5T4J0 391 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 C20orf194Q5TEA3 1177 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 C16orf87Q6PH81 154 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 LINGO4Q6UY18 593 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 TMEM184AQ6ZMB5 413 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 ZNF704Q6ZNC4 412 aaPredicted RBP3.89□□□□□ -1.79
HMGB3-203ENST00000430118 ADGRD2Q7Z7M1 963 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 EXOC3L1Q86VI1 746 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 CCDC50Q8IVM0 306 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 CLYBLQ8N0X4 340 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 ZNF619Q8N2I2 560 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 GBP7Q8N8V2 638 aaPredicted RBP3.89□□□□□ -1.79
HMGB3-203ENST00000430118 OR8K1Q8NGG5 319 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 ERMNQ8TAM6 284 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 FAM81AQ8TBF8 368 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 RAD54LQ92698 747 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 N4BP2L2Q92802 583 aaPredicted RBP3.89□□□□□ -1.79
HMGB3-203ENST00000430118 CENPTQ96BT3 561 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 SNRNP40Q96DI7 357 aaKnown RBP3.89□□□□□ -1.79
HMGB3-203ENST00000430118 MTERF3Q96E29 417 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 EEF2KMTQ96G04 330 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 AK8Q96MA6 479 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 CPNE1Q99829 537 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 BTBD10Q9BSF8 475 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 C16orf70Q9BSU1 422 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 LMF2Q9BU23 707 aaKnown RBP3.89□□□□□ -1.79
HMGB3-203ENST00000430118 NACAP1Q9BZK3 213 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 FOXP1Q9H334 677 aaPredicted RBP3.89□□□□□ -1.79
HMGB3-203ENST00000430118 TSPY26PQ9H489 355 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 LMAN1LQ9HAT1 526 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 SPATA7Q9P0W8 599 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 AGO1Q9UL18 857 aaKnown RBP3.89□□□□□ -1.79
HMGB3-203ENST00000430118 ODF2LQ9ULJ1 636 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 STX8Q9UNK0 236 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 HS3ST3B1Q9Y662 390 aa3.89□□□□□ -1.79
HMGB3-203ENST00000430118 CACNA1GO43497 2377 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 GREB1LQ9C091 1923 aaPredicted RBP3.88□□□□□ -1.79
HMGB3-203ENST00000430118 A0A0U1RQJ8 604 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 TMEM272A0A1B0GTI8 110 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 GOLGA6L10A6NI86 522 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 GOLGA6L19H0YKK7 550 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 I6L893 689 aaPredicted RBP3.88□□□□□ -1.79
HMGB3-203ENST00000430118 CYR61O00622 381 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 XRCC3O43542 346 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 NEMFO60524 1076 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 LRP3O75074 770 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 DDHD2O94830 711 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 NDUFB8O95169 186 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 PGLSO95336 258 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 GCNT3O95395 438 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 C9P02748 559 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 LCATP04180 440 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 RLN1P04808 185 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 ZNF286BP0CG31 522 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 P4HA1P13674 534 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 MPGP29372 298 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 CA8P35219 290 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 GCKP35557 465 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 ACVRL1P37023 503 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 ARHGAP25P42331 645 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 RFX2P48378 723 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 AMTP48728 403 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 ST8SIA6P61647 398 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 RPS6P62753 249 aaKnown RBP3.88□□□□□ -1.79
HMGB3-203ENST00000430118 DLK1P80370 383 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 ARHGAP1Q07960 439 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 LASP1Q14847 261 aaKnown RBP3.88□□□□□ -1.79
HMGB3-203ENST00000430118 SBK1Q52WX2 424 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 FAM69BQ5VUD6 431 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 PLPP4Q5VZY2 271 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 C8orf82Q6P1X6 216 aaPredicted RBP3.88□□□□□ -1.79
HMGB3-203ENST00000430118 LRRC31Q6UY01 552 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 Q75L30 129 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.88□□□□□ -1.79
HMGB3-203ENST00000430118 YTHDF3Q7Z739 585 aaKnown RBP3.88□□□□□ -1.79
HMGB3-203ENST00000430118 PRIMA1Q86XR5 153 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 CNGA4Q8IV77 575 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 FAM114A1Q8IWE2 563 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 Q8N1X5 172 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 C1orf52Q8N6N3 182 aaKnown RBP3.88□□□□□ -1.79
HMGB3-203ENST00000430118 TEX9Q8N6V9 391 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 SMYD1Q8NB12 490 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 OR14A16Q8NHC5 309 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 B4GALNT2Q8NHY0 566 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 ATP8B4Q8TF62 1192 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 OIT3Q8WWZ8 545 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 PPP1R14BQ96C90 147 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 ZNF689Q96CS4 500 aaPredicted RBP3.88□□□□□ -1.79
HMGB3-203ENST00000430118 FAM81BQ96LP2 452 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 CTAGE1Q96RT6 745 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 MYADMQ96S97 322 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 IWS1Q96ST2 819 aa3.88□□□□□ -1.79
HMGB3-203ENST00000430118 SPXQ9BT56 116 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms