RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 TRMT1Q9NXH9 659 aaKnown RBP16.14■□□□□ 0.17
TRIM39-209ENST00000428728 ARL15Q9NXU5 204 aa16.14■□□□□ 0.17
TRIM39-209ENST00000428728 C19orf25Q9UFG5 118 aaPredicted RBP16.14■□□□□ 0.17
TRIM39-209ENST00000428728 CHMP2BQ9UQN3 213 aa16.14■□□□□ 0.17
TRIM39-209ENST00000428728 A8MUI8 341 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 CES2O00748 559 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 SLC16A5O15375 505 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 LCMT2O60294 686 aaKnown RBP16.13■□□□□ 0.17
TRIM39-209ENST00000428728 CDC123O75794 336 aaPredicted RBP16.13■□□□□ 0.17
TRIM39-209ENST00000428728 AHSGP02765 367 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 HIST1H2AGP0C0S8 130 aaPredicted RBP16.13■□□□□ 0.17
TRIM39-209ENST00000428728 SLC35G6P0C7Q6 338 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 ICAM2P13598 275 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 HIST1H2ADP20671 130 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 TDGF1P3P51864 188 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 INAQ16352 499 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 C1QL3Q5VWW1 255 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 FCRLBQ6BAA4 426 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 CAPN13Q6MZZ7 669 aaPredicted RBP16.13■□□□□ 0.17
TRIM39-209ENST00000428728 KIAA0408Q6ZU52 694 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 PCGF5Q86SE9 256 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 FJX1Q86VR8 437 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 PDSS2Q86YH6 399 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 SLC13A3Q8WWT9 602 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 NR4A3Q92570 626 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 HIST1H2AHQ96KK5 128 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 PWWP2AQ96N64 755 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 CYTH2Q99418 400 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 HIST1H2AJQ99878 128 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 NAT9Q9BTE0 207 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 H2AFJQ9BTM1 129 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 NAALAD2Q9Y3Q0 740 aa16.13■□□□□ 0.17
TRIM39-209ENST00000428728 OR5H15A6NDH6 313 aa16.12■□□□□ 0.17
TRIM39-209ENST00000428728 NDUFS4O43181 175 aa16.12■□□□□ 0.17
TRIM39-209ENST00000428728 ZSCAN12O43309 604 aa16.12■□□□□ 0.17
TRIM39-209ENST00000428728 ZG16O60844 167 aa16.12■□□□□ 0.17
TRIM39-209ENST00000428728 GUCA1CO95843 209 aa16.12■□□□□ 0.17
TRIM39-209ENST00000428728 TSPAN12O95859 305 aa16.12■□□□□ 0.17
TRIM39-209ENST00000428728 SERPIND1P05546 499 aa16.12■□□□□ 0.17
TRIM39-209ENST00000428728 IL2P60568 153 aa16.12■□□□□ 0.17
TRIM39-209ENST00000428728 PMP22Q01453 160 aa16.12■□□□□ 0.17
TRIM39-209ENST00000428728 HECTD2Q5U5R9 776 aa16.12■□□□□ 0.17
TRIM39-209ENST00000428728 TRMT10BQ6PF06 316 aaKnown RBP16.12■□□□□ 0.17
TRIM39-209ENST00000428728 ANKRD37Q7Z713 158 aa16.12■□□□□ 0.17
TRIM39-209ENST00000428728 MFSD9Q8NBP5 474 aa16.12■□□□□ 0.17
TRIM39-209ENST00000428728 SUN3Q8TAQ9 357 aa16.12■□□□□ 0.17
TRIM39-209ENST00000428728 TM4SF19Q96DZ7 209 aa16.12■□□□□ 0.17
TRIM39-209ENST00000428728 PEX11GQ96HA9 241 aa16.12■□□□□ 0.17
TRIM39-209ENST00000428728 CAPZA3Q96KX2 299 aa16.12■□□□□ 0.17
TRIM39-209ENST00000428728 OLFM1Q99784 485 aa16.12■□□□□ 0.17
TRIM39-209ENST00000428728 HAUS8Q9BT25 410 aa16.12■□□□□ 0.17
TRIM39-209ENST00000428728 RNF32Q9H0A6 362 aa16.12■□□□□ 0.17
TRIM39-209ENST00000428728 PLAC1Q9HBJ0 212 aa16.12■□□□□ 0.17
TRIM39-209ENST00000428728 TEKT2Q9UIF3 430 aa16.12■□□□□ 0.17
TRIM39-209ENST00000428728 OR1F1O43749 312 aa16.11■□□□□ 0.17
TRIM39-209ENST00000428728 RASAL1O95294 804 aa16.11■□□□□ 0.17
TRIM39-209ENST00000428728 CYC1P08574 325 aa16.11■□□□□ 0.17
TRIM39-209ENST00000428728 NPPBP16860 134 aa16.11■□□□□ 0.17
TRIM39-209ENST00000428728 ELK3P41970 407 aa16.11■□□□□ 0.17
TRIM39-209ENST00000428728 AGTR2P50052 363 aa16.11■□□□□ 0.17
TRIM39-209ENST00000428728 ST13P50502 369 aaKnown RBP16.11■□□□□ 0.17
TRIM39-209ENST00000428728 CCR8P51685 355 aa16.11■□□□□ 0.17
TRIM39-209ENST00000428728 ABRAXAS2Q15018 415 aa16.11■□□□□ 0.17
TRIM39-209ENST00000428728 ZXDCQ2QGD7 858 aaPredicted RBP16.11■□□□□ 0.17
TRIM39-209ENST00000428728 TEDDM1Q5T9Z0 273 aa16.11■□□□□ 0.17
TRIM39-209ENST00000428728 DUPD1Q68J44 220 aa16.11■□□□□ 0.17
TRIM39-209ENST00000428728 ZNF324BQ6AW86 544 aaPredicted RBP16.11■□□□□ 0.17
TRIM39-209ENST00000428728 PLAG1Q6DJT9 500 aa16.11■□□□□ 0.17
TRIM39-209ENST00000428728 GFRALQ6UXV0 394 aa16.11■□□□□ 0.17
TRIM39-209ENST00000428728 GALNT7Q86SF2 657 aa16.11■□□□□ 0.17
TRIM39-209ENST00000428728 KLHL7Q8IXQ5 586 aa16.11■□□□□ 0.17
TRIM39-209ENST00000428728 PDIK1LQ8N165 341 aa16.11■□□□□ 0.17
TRIM39-209ENST00000428728 OR5T3Q8NGG3 340 aa16.11■□□□□ 0.17
TRIM39-209ENST00000428728 SLCO2A1Q92959 643 aa16.11■□□□□ 0.17
TRIM39-209ENST00000428728 MOCOSQ96EN8 888 aa16.11■□□□□ 0.17
TRIM39-209ENST00000428728 TSNARE1Q96NA8 513 aa16.11■□□□□ 0.17
TRIM39-209ENST00000428728 OR4K3Q96R72 315 aa16.11■□□□□ 0.17
TRIM39-209ENST00000428728 WDR83Q9BRX9 315 aaKnown RBP16.11■□□□□ 0.17
TRIM39-209ENST00000428728 TRIM54Q9BYV2 358 aa16.11■□□□□ 0.17
TRIM39-209ENST00000428728 KCNK13Q9HB14 408 aa16.11■□□□□ 0.17
TRIM39-209ENST00000428728 PRAMEF2O60811 474 aa16.1■□□□□ 0.17
TRIM39-209ENST00000428728 B3GALT4O96024 378 aa16.1■□□□□ 0.17
TRIM39-209ENST00000428728 STSP08842 583 aa16.1■□□□□ 0.17
TRIM39-209ENST00000428728 IVDP26440 423 aa16.1■□□□□ 0.17
TRIM39-209ENST00000428728 AP1S2P56377 157 aa16.1■□□□□ 0.17
TRIM39-209ENST00000428728 OLR1P78380 273 aa16.1■□□□□ 0.17
TRIM39-209ENST00000428728 SFT2D3Q587I9 215 aa16.1■□□□□ 0.17
TRIM39-209ENST00000428728 CATSPEREQ5SY80 951 aa16.1■□□□□ 0.17
TRIM39-209ENST00000428728 FAM45BPQ6NSW5 357 aa16.1■□□□□ 0.17
TRIM39-209ENST00000428728 PAPD4Q6PIY7 484 aaKnown RBP16.1■□□□□ 0.17
TRIM39-209ENST00000428728 BEST3Q8N1M1 668 aa16.1■□□□□ 0.17
TRIM39-209ENST00000428728 ZNF740Q8NDX6 193 aa16.1■□□□□ 0.17
TRIM39-209ENST00000428728 ABHD11Q8NFV4 315 aa16.1■□□□□ 0.17
TRIM39-209ENST00000428728 OR56A3Q8NH54 315 aa16.1■□□□□ 0.17
TRIM39-209ENST00000428728 FAM45AQ8TCE6 357 aa16.1■□□□□ 0.17
TRIM39-209ENST00000428728 TSLPQ969D9 159 aa16.1■□□□□ 0.17
TRIM39-209ENST00000428728 FBXL8Q96CD0 374 aa16.1■□□□□ 0.17
TRIM39-209ENST00000428728 SNF8Q96H20 258 aa16.1■□□□□ 0.17
TRIM39-209ENST00000428728 TRIM51Q9BSJ1 452 aa16.1■□□□□ 0.17
TRIM39-209ENST00000428728 FAM129AQ9BZQ8 928 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms