RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 EPORP19235 508 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 SCTRP47872 440 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 PRKAA2P54646 552 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 RPS15P62841 145 aaKnown RBP13.88□□□□□ -0.19
SGCE-204ENST00000428696 HERVK_113P63132 956 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 REEP5Q00765 189 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 RGS1Q08116 209 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 LAPTM5Q13571 262 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 CPSF6Q16630 551 aaKnown RBP eCLIP13.88□□□□□ -0.19
SGCE-204ENST00000428696 MUM1Q2TAK8 710 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 NKAIN1Q4KMZ8 207 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 SGO1Q5FBB7 561 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 PRAMEF9Q5VWM5 478 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 TTC19Q6DKK2 380 aaPredicted RBP13.88□□□□□ -0.19
SGCE-204ENST00000428696 LCN10Q6JVE6 187 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 RHBDD2Q6NTF9 364 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 C19orf48Q6RUI8 117 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 VN1R4Q7Z5H5 301 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 MILR1Q7Z6M3 343 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 EXOC3L1Q86VI1 746 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 DSELQ8IZU8 1212 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 GOLGA6L1Q8N7Z2 621 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 TRPV3Q8NET8 790 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 TCP10LQ8TDR4 215 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 CT55Q8WUE5 264 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 CCDC126Q96EE4 140 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 MMABQ96EY8 250 aaPredicted RBP13.88□□□□□ -0.19
SGCE-204ENST00000428696 CCNL2Q96S94 520 aaPredicted RBP13.88□□□□□ -0.19
SGCE-204ENST00000428696 EFCAB11Q9BUY7 163 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 ERVK-6Q9BXR3 956 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 DRC3Q9H069 523 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 SENP1Q9P0U3 644 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 ZFP69BQ9UJL9 534 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 PCTPQ9UKL6 214 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 PLLPQ9Y342 182 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 RNF11Q9Y3C5 154 aa13.88□□□□□ -0.19
SGCE-204ENST00000428696 APC2O95996 2303 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 A0A0A6YYC8 382 aaPredicted RBP13.87□□□□□ -0.19
SGCE-204ENST00000428696 A0A1B0GX78 115 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 FITM1A5D6W6 292 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 SRRM3A6NNA2 597 aaPredicted RBP13.87□□□□□ -0.19
SGCE-204ENST00000428696 G3V2L1 256 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 I3L1I5 382 aaPredicted RBP13.87□□□□□ -0.19
SGCE-204ENST00000428696 OR7A17O14581 309 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 DSCR3O14972 297 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 CLDN9O95484 217 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 NEFHP12036 1026 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 IMPDH1P20839 514 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 STAT5AP42229 794 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 NAGLUP54802 743 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 PRTGQ2VWP7 1150 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 UNC50Q53HI1 259 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 TOR1AIP1Q5JTV8 583 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 ZNF678Q5SXM1 525 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 ARHGAP40Q5TG30 622 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 MED27Q6P2C8 311 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 CCDC81Q6ZN84 652 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.87□□□□□ -0.19
SGCE-204ENST00000428696 ANKRD53Q8N9V6 530 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 ZNF285Q96NJ3 590 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 PAIP2Q9BPZ3 127 aaKnown RBP13.87□□□□□ -0.19
SGCE-204ENST00000428696 EHD1Q9H4M9 534 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 ZNF304Q9HCX3 659 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 MID2Q9UJV3 735 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 ZNF490Q9ULM2 529 aaPredicted RBP13.87□□□□□ -0.19
SGCE-204ENST00000428696 CDC14AQ9UNH5 594 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 CELSR3Q9NYQ7 3312 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 SPTBP11277 2137 aa13.87□□□□□ -0.19
SGCE-204ENST00000428696 URB1O60287 2271 aaKnown RBP13.87□□□□□ -0.19
SGCE-204ENST00000428696 DMXL2Q8TDJ6 3036 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 UQCRHLA0A096LP55 91 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 WDR91A4D1P6 747 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 PPP6CO00743 305 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 FFAR3O14843 346 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 GPR42O15529 346 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 WFS1O76024 890 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 MED26O95402 600 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 UQCRHP07919 91 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 PIM1P11309 404 aaPredicted RBP13.86□□□□□ -0.19
SGCE-204ENST00000428696 H2AFXP16104 143 aaPredicted RBP13.86□□□□□ -0.19
SGCE-204ENST00000428696 CD22P20273 847 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 RORAP35398 523 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 AHRP35869 848 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 AVPR1BP47901 424 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 RAB8AP61006 207 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 CLCQ05315 142 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 DNASE1L3Q13609 305 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 PWP1Q13610 501 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 MAP7Q14244 749 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 FAM69BQ5VUD6 431 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 YOD1Q5VVQ6 348 aaPredicted RBP13.86□□□□□ -0.19
SGCE-204ENST00000428696 ADNP2Q6IQ32 1131 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 C10orf107Q8IVU9 208 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 PRSS58Q8IYP2 241 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 ZSCAN1Q8NBB4 408 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 TTLQ8NG68 377 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 OR52B6Q8NGF0 335 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 OR9A4Q8NGU2 314 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 RDH11Q8TC12 318 aa13.86□□□□□ -0.19
SGCE-204ENST00000428696 PROKR1Q8TCW9 393 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms