RNA–Protein interactions for RNA: ENST00000427487.5

HDLBP-215, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-215ENST00000427487 CHSY3Q70JA7 882 aa11.53□□□□□ -0.56
HDLBP-215ENST00000427487 PIGWQ7Z7B1 504 aa11.53□□□□□ -0.56
HDLBP-215ENST00000427487 TRIM73Q86UV7 250 aa11.53□□□□□ -0.56
HDLBP-215ENST00000427487 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.53□□□□□ -0.56
HDLBP-215ENST00000427487 DCBLD1Q8N8Z6 715 aa11.53□□□□□ -0.56
HDLBP-215ENST00000427487 ANKRD53Q8N9V6 530 aa11.53□□□□□ -0.56
HDLBP-215ENST00000427487 ZNF740Q8NDX6 193 aa11.53□□□□□ -0.56
HDLBP-215ENST00000427487 CEP70Q8NHQ1 597 aa11.53□□□□□ -0.56
HDLBP-215ENST00000427487 CREB3L4Q8TEY5 395 aa11.53□□□□□ -0.56
HDLBP-215ENST00000427487 CCT6BQ92526 530 aa11.53□□□□□ -0.56
HDLBP-215ENST00000427487 RERGQ96A58 199 aaPredicted RBP11.53□□□□□ -0.56
HDLBP-215ENST00000427487 PPP3R2Q96LZ3 170 aa11.53□□□□□ -0.56
HDLBP-215ENST00000427487 FCRL4Q96PJ5 515 aa11.53□□□□□ -0.56
HDLBP-215ENST00000427487 KCNA7Q96RP8 456 aa11.53□□□□□ -0.56
HDLBP-215ENST00000427487 CCDC28BQ9BUN5 200 aa11.53□□□□□ -0.56
HDLBP-215ENST00000427487 MS4A8Q9BY19 250 aa11.53□□□□□ -0.56
HDLBP-215ENST00000427487 NLNQ9BYT8 704 aa11.53□□□□□ -0.56
HDLBP-215ENST00000427487 ZMYND15Q9H091 742 aa11.53□□□□□ -0.56
HDLBP-215ENST00000427487 SPNS1Q9H2V7 528 aa11.53□□□□□ -0.56
HDLBP-215ENST00000427487 TUBB1Q9H4B7 451 aa11.53□□□□□ -0.56
HDLBP-215ENST00000427487 CLK4Q9HAZ1 481 aaKnown RBP11.53□□□□□ -0.56
HDLBP-215ENST00000427487 FANCEQ9HB96 536 aa11.53□□□□□ -0.56
HDLBP-215ENST00000427487 AHSPQ9NZD4 102 aa11.53□□□□□ -0.56
HDLBP-215ENST00000427487 AKAP7Q9P0M2 348 aaPredicted RBP11.53□□□□□ -0.56
HDLBP-215ENST00000427487 CCL27Q9Y4X3 112 aa11.53□□□□□ -0.56
HDLBP-215ENST00000427487 TIMM22Q9Y584 194 aa11.53□□□□□ -0.56
HDLBP-215ENST00000427487 TMEM233B4DJY2 109 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 FFAR3O14843 346 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 PIP5K1BO14986 540 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 GPR42O15529 346 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 KIF1CO43896 1103 aaKnown RBP11.52□□□□□ -0.57
HDLBP-215ENST00000427487 LCMT2O60294 686 aaKnown RBP11.52□□□□□ -0.57
HDLBP-215ENST00000427487 PDYNP01213 254 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 PRR35P0CG20 571 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 PVRP15151 417 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 GSTM5P46439 218 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 ARL4DP49703 201 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 SEC24CP53992 1094 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 INSM1Q01101 510 aaPredicted RBP11.52□□□□□ -0.57
HDLBP-215ENST00000427487 BTKQ06187 659 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 TGM3Q08188 693 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 MAD2L1Q13257 205 aaPredicted RBP11.52□□□□□ -0.57
HDLBP-215ENST00000427487 ABRAXAS2Q15018 415 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 SPIN4Q56A73 249 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 DEPDC1Q5TB30 811 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 CGB2Q6NT52 195 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 GALNT18Q6P9A2 607 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 Q6ZSR9 355 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 LARP4Q71RC2 724 aaKnown RBP eCLIP11.52□□□□□ -0.57
HDLBP-215ENST00000427487 TMPRSS9Q7Z410 1059 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 VN1R5Q7Z5H4 357 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 VN1R4Q7Z5H5 301 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 ASPGQ86U10 573 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 MCATQ8IVS2 390 aaKnown RBP11.52□□□□□ -0.57
HDLBP-215ENST00000427487 FAM20CQ8IXL6 584 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 AGBL5Q8NDL9 886 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 SLC13A3Q8WWT9 602 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 C11orf24Q96F05 449 aaPredicted RBP11.52□□□□□ -0.57
HDLBP-215ENST00000427487 LIN37Q96GY3 246 aaPredicted RBP11.52□□□□□ -0.57
HDLBP-215ENST00000427487 PPM1MQ96MI6 270 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 CCT8L2Q96SF2 557 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 RTKNQ9BST9 563 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 SHCBP1LQ9BZQ2 653 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 B3GNT4Q9C0J1 378 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 STRADBQ9C0K7 418 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 SLC6A16Q9GZN6 736 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 ROGDIQ9GZN7 287 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 ASIC5Q9NY37 505 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 TMEM9Q9P0T7 183 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 VPS29Q9UBQ0 182 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 ADAM29Q9UKF5 820 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 ATXN7L1Q9ULK2 861 aaPredicted RBP11.52□□□□□ -0.57
HDLBP-215ENST00000427487 WBP11Q9Y2W2 641 aaKnown RBP11.52□□□□□ -0.57
HDLBP-215ENST00000427487 SLC22A7Q9Y694 548 aa11.52□□□□□ -0.57
HDLBP-215ENST00000427487 COL27A1Q8IZC6 1860 aaPredicted RBP11.52□□□□□ -0.57
HDLBP-215ENST00000427487 A0A088AWK7 358 aa11.51□□□□□ -0.57
HDLBP-215ENST00000427487 FEZF1A0PJY2 475 aa11.51□□□□□ -0.57
HDLBP-215ENST00000427487 LRIT2A6NDA9 550 aa11.51□□□□□ -0.57
HDLBP-215ENST00000427487 MAGEB17A8MXT2 336 aa11.51□□□□□ -0.57
HDLBP-215ENST00000427487 B4E171 279 aa11.51□□□□□ -0.57
HDLBP-215ENST00000427487 H0YGG7 62 aa11.51□□□□□ -0.57
HDLBP-215ENST00000427487 H3BMH7 237 aa11.51□□□□□ -0.57
HDLBP-215ENST00000427487 SDHDO14521 159 aa11.51□□□□□ -0.57
HDLBP-215ENST00000427487 TBX6O95947 436 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-215ENST00000427487 PCNAP12004 261 aa11.51□□□□□ -0.57
HDLBP-215ENST00000427487 ZNF10P21506 573 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-215ENST00000427487 SERPINB3P29508 390 aa11.51□□□□□ -0.57
HDLBP-215ENST00000427487 CSTF2P33240 577 aaKnown RBP eCLIP11.51□□□□□ -0.57
HDLBP-215ENST00000427487 TSPAN7P41732 249 aa11.51□□□□□ -0.57
HDLBP-215ENST00000427487 MRPL19P49406 292 aaKnown RBP11.51□□□□□ -0.57
HDLBP-215ENST00000427487 HTR6P50406 440 aa11.51□□□□□ -0.57
HDLBP-215ENST00000427487 PDX1P52945 283 aa11.51□□□□□ -0.57
HDLBP-215ENST00000427487 AQP5P55064 265 aa11.51□□□□□ -0.57
HDLBP-215ENST00000427487 ARF3P61204 181 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-215ENST00000427487 SKP1P63208 163 aa11.51□□□□□ -0.57
HDLBP-215ENST00000427487 MEF2AQ02078 507 aaPredicted RBP11.51□□□□□ -0.57
HDLBP-215ENST00000427487 FAM53BQ14153 422 aa11.51□□□□□ -0.57
HDLBP-215ENST00000427487 IL11RAQ14626 422 aa11.51□□□□□ -0.57
HDLBP-215ENST00000427487 PRTGQ2VWP7 1150 aa11.51□□□□□ -0.57
HDLBP-215ENST00000427487 KHDRBS2Q5VWX1 349 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms