RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 PEX1O43933 1283 aa13.29□□□□□ -0.28
HDAC6-206ENST00000426196 ZNF189O75820 626 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-206ENST00000426196 ACVR2AP27037 513 aa13.29□□□□□ -0.28
HDAC6-206ENST00000426196 HOXC12P31275 282 aa13.29□□□□□ -0.28
HDAC6-206ENST00000426196 TRHRP34981 398 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-206ENST00000426196 OR4D2P58180 307 aa13.29□□□□□ -0.28
HDAC6-206ENST00000426196 PRDX1Q06830 199 aaKnown RBP13.29□□□□□ -0.28
HDAC6-206ENST00000426196 ASTE1Q2TB18 679 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-206ENST00000426196 AARS2Q5JTZ9 985 aaKnown RBP13.29□□□□□ -0.28
HDAC6-206ENST00000426196 FBXW10Q5XX13 1052 aa13.29□□□□□ -0.28
HDAC6-206ENST00000426196 ICE2Q659A1 982 aa13.29□□□□□ -0.28
HDAC6-206ENST00000426196 KIF2BQ8N4N8 673 aa13.29□□□□□ -0.28
HDAC6-206ENST00000426196 ZFP62Q8NB50 900 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-206ENST00000426196 OR13J1Q8NGT2 312 aa13.29□□□□□ -0.28
HDAC6-206ENST00000426196 OR9A1PQ8NGU1 263 aa13.29□□□□□ -0.28
HDAC6-206ENST00000426196 OR6P1Q8NGX9 317 aa13.29□□□□□ -0.28
HDAC6-206ENST00000426196 OR4L1Q8NH43 312 aa13.29□□□□□ -0.28
HDAC6-206ENST00000426196 ELP5Q8TE02 316 aa13.29□□□□□ -0.28
HDAC6-206ENST00000426196 CREB3L4Q8TEY5 395 aa13.29□□□□□ -0.28
HDAC6-206ENST00000426196 ZNF395Q9H8N7 513 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-206ENST00000426196 NEUROD4Q9HD90 331 aa13.29□□□□□ -0.28
HDAC6-206ENST00000426196 CRIM1Q9NZV1 1036 aa13.29□□□□□ -0.28
HDAC6-206ENST00000426196 TAC3Q9UHF0 121 aa13.29□□□□□ -0.28
HDAC6-206ENST00000426196 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.29□□□□□ -0.28
HDAC6-206ENST00000426196 NPIPA2E9PIF3 369 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 NPIPA3F8WFD2 350 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 HAT1O14929 419 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 ATE1O95260 518 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 GAS8O95995 478 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 ERGP11308 486 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 IL1RNP18510 177 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 PCSK6P29122 969 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 BCL6P41182 706 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 UBASH3AP57075 661 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 MLF1P58340 268 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 PRAMEP78395 509 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 PARP6Q2NL67 630 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 ANKRD20A4Q4UJ75 823 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 FLYWCH1Q4VC44 716 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 B3GNT6Q6ZMB0 384 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 PRSS41Q7RTY9 318 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 WDR53Q7Z5U6 358 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-206ENST00000426196 PLPP5Q8NEB5 264 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 OR52N2Q8NGI0 321 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 EBNA1BP2Q99848 306 aaKnown RBP13.28□□□□□ -0.28
HDAC6-206ENST00000426196 TTYH2Q9BSA4 534 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 DEFB127Q9H1M4 99 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 DMRT3Q9NQL9 472 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 PNPLA3Q9NST1 481 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 ANAPC5Q9UJX4 755 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 MXRA5Q9NR99 2828 aa13.28□□□□□ -0.28
HDAC6-206ENST00000426196 A0A0G2JNJ9 132 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 ZNF839A8K0R7 811 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 ARHGEF33A8MVX0 844 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 MAGEB17A8MXT2 336 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 SGK494L7N484 410 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 BCKDKO14874 412 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 PSMD3O43242 534 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 CDC123O75794 336 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-206ENST00000426196 STATHP02808 62 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 MARCKSL1P49006 195 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 GPR85P60893 370 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 MPP1Q00013 466 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 RHAGQ02094 409 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 SNTB1Q13884 538 aaKnown RBP13.27□□□□□ -0.29
HDAC6-206ENST00000426196 ARHGAP19Q14CB8 494 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 P3H1Q32P28 736 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 GXYLT1Q4G148 440 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 MEI1Q5TIA1 1274 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 LINC00523Q86TU6 105 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 PLD3Q8IV08 490 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 CYP4Z2PQ8N1L4 340 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 OR5M9Q8NGP3 310 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 FAM222BQ8WU58 562 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 TSLPQ969D9 159 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 FAM118BQ9BPY3 351 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 RBCK1Q9BYM8 510 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 ANKHQ9HCJ1 492 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 Q9UFV3 132 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 SLC2A6Q9UGQ3 507 aa13.27□□□□□ -0.29
HDAC6-206ENST00000426196 TSR3Q9UJK0 312 aaKnown RBP13.27□□□□□ -0.29
HDAC6-206ENST00000426196 R3HDM2Q9Y2K5 976 aaKnown RBP13.27□□□□□ -0.29
HDAC6-206ENST00000426196 OR14I1A6ND48 311 aa13.26□□□□□ -0.29
HDAC6-206ENST00000426196 FAM47E-STBD1D6RA91 191 aa13.26□□□□□ -0.29
HDAC6-206ENST00000426196 ACOT7O00154 380 aa13.26□□□□□ -0.29
HDAC6-206ENST00000426196 PJA2O43164 708 aa13.26□□□□□ -0.29
HDAC6-206ENST00000426196 KIF5CO60282 957 aa13.26□□□□□ -0.29
HDAC6-206ENST00000426196 LY6G6DO95868 133 aa13.26□□□□□ -0.29
HDAC6-206ENST00000426196 GLI4P10075 376 aa13.26□□□□□ -0.29
HDAC6-206ENST00000426196 IL10P22301 178 aa13.26□□□□□ -0.29
HDAC6-206ENST00000426196 UQCRC1P31930 480 aa13.26□□□□□ -0.29
HDAC6-206ENST00000426196 HSD17B2P37059 387 aa13.26□□□□□ -0.29
HDAC6-206ENST00000426196 TTPAP49638 278 aa13.26□□□□□ -0.29
HDAC6-206ENST00000426196 COPS2P61201 443 aa13.26□□□□□ -0.29
HDAC6-206ENST00000426196 SNRPNP63162 240 aaKnown RBP13.26□□□□□ -0.29
HDAC6-206ENST00000426196 TPM4P67936 248 aa13.26□□□□□ -0.29
HDAC6-206ENST00000426196 ABATP80404 500 aa13.26□□□□□ -0.29
HDAC6-206ENST00000426196 SEMA3AQ14563 771 aa13.26□□□□□ -0.29
HDAC6-206ENST00000426196 TSTD2Q5T7W7 516 aa13.26□□□□□ -0.29
HDAC6-206ENST00000426196 ZNF585AQ6P3V2 769 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms