RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 KIAA0930Q6ICG6 404 aaPredicted RBP11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CAPN13Q6MZZ7 669 aaPredicted RBP11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 SPNS3Q6ZMD2 512 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 UBE2R2Q712K3 238 aaPredicted RBP11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ASPGQ86U10 573 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 PLD3Q8IV08 490 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CYP4X1Q8N118 509 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 PPFIBP2Q8ND30 876 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 MDS2Q8NDY4 140 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ACRBPQ8NEB7 543 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ASB11Q8WXH4 323 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 LPGAT1Q92604 370 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ALKBH8Q96BT7 664 aaKnown RBP11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 MFSD3Q96ES6 412 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 SCMH1Q96GD3 660 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 SIGLEC12Q96PQ1 595 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 HAUS8Q9BT25 410 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CLK4Q9HAZ1 481 aaKnown RBP11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 KCNJ16Q9NPI9 418 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 HCN3Q9P1Z3 774 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 SLC22A7Q9Y694 548 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 TCRBV7S2A1N4TA0A589 114 aa11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 SGK494L7N484 410 aa11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 EIF3FO00303 357 aaPredicted RBP11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 SLC25A12O75746 678 aa11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 TPOP07202 933 aa11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ETS1P14921 441 aa11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 IL1RNP18510 177 aa11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 YBX1P67809 324 aaKnown RBP11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CSNK1G2P78368 415 aa11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 MPP1Q00013 466 aa11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 RGS1Q08116 209 aa11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 DHX34Q14147 1143 aaKnown RBP11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 GBX1Q14549 363 aa11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 PHKG1Q16816 387 aa11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 DRICH1Q6PGQ1 229 aaPredicted RBP11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 LANCL3Q6ZV70 420 aa11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 DOLPP1Q86YN1 238 aa11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ZNF295-AS1Q8N0V1 137 aa11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CLYBLQ8N0X4 340 aa11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 PRELID2Q8N945 189 aa11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 MYRIPQ8NFW9 859 aa11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 RND1Q92730 232 aa11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 KCNJ9Q92806 393 aa11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 DEFB126Q9BYW3 111 aa11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ENKD1Q9H0I2 346 aa11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 TSPAN10Q9H1Z9 355 aaPredicted RBP11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 DHRS7Q9Y394 339 aa11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CROCCQ5TZA2 2017 aa11.55□□□□□ -0.56
HLA-DQB3-203ENST00000425319 IGKV1-8A0A0C4DH67 115 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 SDR42E2A6NKP2 422 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 GOLGA8KD6RF30 607 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 GOLGA8TH3BQL2 631 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 GFYI3L273 518 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 NRP2O60462 931 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 SERPIND1P05546 499 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 C8GP07360 202 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 TPSB2P20231 275 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 KIR3DL1P43629 444 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 USP10Q14694 798 aaKnown RBP11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 TPSAB1Q15661 275 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 TMEM214Q6NUQ4 689 aaKnown RBP11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CES3Q6UWW8 571 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 RAD9BQ6WBX8 426 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ACAD11Q709F0 780 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ABHD13Q7L211 337 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CILP2Q8IUL8 1156 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 MYO1HQ8N1T3 1032 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 TMEM156Q8N614 296 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ZCCHC10Q8TBK6 192 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ATL1Q8WXF7 558 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 TBC1D20Q96BZ9 403 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 PEX11GQ96HA9 241 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 FRMD6Q96NE9 622 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 PTCHD1Q96NR3 888 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CCDC77Q9BR77 488 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ZNF559Q9BR84 538 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 SYBUQ9NX95 663 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 NAALAD2Q9Y3Q0 740 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ITPR2Q14571 2701 aa11.54□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ANKRD12Q6UB98 2062 aa11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 SPENQ96T58 3664 aaKnown RBP11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 KRT87PA6NCN2 255 aa11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 SYNDIG1LA6NDD5 238 aa11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 SLC16A5O15375 505 aa11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 NME2P1O60361 137 aa11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CDC40O60508 579 aaKnown RBP eCLIP11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 AVILO75366 819 aa11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 FHP07954 510 aa11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ZSCAN5DPP0CG00 497 aa11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 NME2P22392 152 aa11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CHRNB4P30926 498 aa11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 HLCSP50747 726 aa11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CCR8P51685 355 aa11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 SLC26A5P58743 744 aa11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 PWP1Q13610 501 aa11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 KCNJ11Q14654 390 aa11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ZNF470Q6ECI4 717 aa11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ARHGAP11AQ6P4F7 1023 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms