RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 RLIMQ9NVW2 624 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 RHBDL2Q9NX52 303 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 WBP1LQ9NX94 342 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 SELENONQ9NZV5 590 aa11.48□□□□□ -0.57
PTPRN-204ENST00000423636 H0Y8X5 98 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 INMTO95050 263 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 MYF6P23409 242 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 POU1F1P28069 291 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 TAP2Q03519 686 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 PLEKHS1Q5SXH7 462 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 TMEM236Q5W0B7 351 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 RNF130Q86XS8 419 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 CELF5Q8N6W0 485 aaKnown RBP11.47□□□□□ -0.57
PTPRN-204ENST00000423636 DDHD1Q8NEL9 900 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 WDR20Q8TBZ3 569 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 EXOSC8Q96B26 276 aaKnown RBP11.47□□□□□ -0.57
PTPRN-204ENST00000423636 DTD2Q96FN9 168 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 REXO5Q96IC2 774 aaKnown RBP11.47□□□□□ -0.57
PTPRN-204ENST00000423636 UGT2B28Q9BY64 529 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 RMND5AQ9H871 391 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 FAF1Q9UNN5 650 aaPredicted RBP11.47□□□□□ -0.57
PTPRN-204ENST00000423636 LRRK1Q38SD2 2015 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 SMIM31A0A1B0GVY4 71 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 SLC5A10A0PJK1 596 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 IL3P08700 152 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 GSTM1P09488 218 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 ALDH3A2P51648 485 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 CLDN2P57739 230 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 GSTM4Q03013 218 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 MAP7Q14244 749 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 HORMAD1Q86X24 394 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 PTOV1Q86YD1 416 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 SFTPA2Q8IWL1 248 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 OR8J3Q8NGG0 315 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 NFKBIDQ8NI38 313 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 FGF14Q92915 247 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 PYURFQ96I23 114 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 KCNH6Q9H252 994 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 RETREG1Q9H6L5 497 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 PAK1IP1Q9NWT1 392 aaPredicted RBP11.47□□□□□ -0.57
PTPRN-204ENST00000423636 KIF17Q9P2E2 1029 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 RAB23Q9ULC3 237 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 YBX2Q9Y2T7 364 aaKnown RBP11.47□□□□□ -0.57
PTPRN-204ENST00000423636 ALPK2Q86TB3 2170 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 ADH1CP00326 375 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 CAPNS1P04632 268 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 OR8D1Q8WZ84 308 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 PRR14Q9BWN1 585 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 LHPPQ9H008 270 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 BAG5Q9UL15 447 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 DMTF1Q9Y222 760 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 COMMD3-BMI1R4GMX3 469 aa11.47□□□□□ -0.57
PTPRN-204ENST00000423636 ASCC3Q8N3C0 2202 aaKnown RBP11.46□□□□□ -0.57
PTPRN-204ENST00000423636 HELZP42694 1942 aaKnown RBP11.46□□□□□ -0.57
PTPRN-204ENST00000423636 AP1G1O43747 822 aa11.46□□□□□ -0.57
PTPRN-204ENST00000423636 CBSLP0DN79 551 aa11.46□□□□□ -0.57
PTPRN-204ENST00000423636 GDI1P31150 447 aa11.46□□□□□ -0.57
PTPRN-204ENST00000423636 CBSP35520 551 aa11.46□□□□□ -0.57
PTPRN-204ENST00000423636 CHI3L1P36222 383 aaPredicted RBP11.46□□□□□ -0.57
PTPRN-204ENST00000423636 ESRRGP62508 458 aa11.46□□□□□ -0.57
PTPRN-204ENST00000423636 MVKQ03426 396 aa11.46□□□□□ -0.57
PTPRN-204ENST00000423636 ADRM1Q16186 407 aa11.46□□□□□ -0.57
PTPRN-204ENST00000423636 DUOXA1Q1HG43 343 aa11.46□□□□□ -0.57
PTPRN-204ENST00000423636 MPEG1Q2M385 716 aa11.46□□□□□ -0.57
PTPRN-204ENST00000423636 COQ5Q5HYK3 327 aa11.46□□□□□ -0.57
PTPRN-204ENST00000423636 PARM1Q6UWI2 310 aa11.46□□□□□ -0.57
PTPRN-204ENST00000423636 SLCO4C1Q6ZQN7 724 aa11.46□□□□□ -0.57
PTPRN-204ENST00000423636 DPPA4Q7L190 304 aa11.46□□□□□ -0.57
PTPRN-204ENST00000423636 PATL1Q86TB9 770 aaKnown RBP11.46□□□□□ -0.57
PTPRN-204ENST00000423636 L3MBTL4Q8NA19 623 aa11.46□□□□□ -0.57
PTPRN-204ENST00000423636 CXorf40AQ8TE69 158 aa11.46□□□□□ -0.57
PTPRN-204ENST00000423636 STON2Q8WXE9 905 aa11.46□□□□□ -0.57
PTPRN-204ENST00000423636 TFGQ92734 400 aaPredicted RBP11.46□□□□□ -0.57
PTPRN-204ENST00000423636 GTPBP3Q969Y2 492 aaKnown RBP11.46□□□□□ -0.57
PTPRN-204ENST00000423636 CEP44Q9C0F1 390 aa11.46□□□□□ -0.57
PTPRN-204ENST00000423636 ROGDIQ9GZN7 287 aa11.46□□□□□ -0.57
PTPRN-204ENST00000423636 VCX3AQ9NNX9 186 aa11.46□□□□□ -0.57
PTPRN-204ENST00000423636 PPIL1Q9Y3C6 166 aa11.46□□□□□ -0.57
PTPRN-204ENST00000423636 PIPSLA2A3N6 862 aa11.46□□□□□ -0.58
PTPRN-204ENST00000423636 SYNDIG1LA6NDD5 238 aa11.46□□□□□ -0.58
PTPRN-204ENST00000423636 SCN2BO60939 215 aa11.46□□□□□ -0.58
PTPRN-204ENST00000423636 PSIP1O75475 530 aaKnown RBP11.46□□□□□ -0.58
PTPRN-204ENST00000423636 NTN1O95631 604 aa11.46□□□□□ -0.58
PTPRN-204ENST00000423636 ZNF30P17039 623 aa11.46□□□□□ -0.58
PTPRN-204ENST00000423636 IDH2P48735 452 aaKnown RBP11.46□□□□□ -0.58
PTPRN-204ENST00000423636 PRLHRP49683 370 aa11.46□□□□□ -0.58
PTPRN-204ENST00000423636 DAPP51397 102 aa11.46□□□□□ -0.58
PTPRN-204ENST00000423636 CRYBA2P53672 197 aa11.46□□□□□ -0.58
PTPRN-204ENST00000423636 GRIK2Q13002 908 aa11.46□□□□□ -0.58
PTPRN-204ENST00000423636 PPIGQ13427 754 aaKnown RBP eCLIP11.46□□□□□ -0.58
PTPRN-204ENST00000423636 SHHQ15465 462 aa11.46□□□□□ -0.58
PTPRN-204ENST00000423636 ZNF542PQ5EBM4 170 aa11.46□□□□□ -0.58
PTPRN-204ENST00000423636 FBXO46Q6PJ61 603 aaPredicted RBP11.46□□□□□ -0.58
PTPRN-204ENST00000423636 EID3Q8N140 333 aa11.46□□□□□ -0.58
PTPRN-204ENST00000423636 HDDC3Q8N4P3 179 aa11.46□□□□□ -0.58
PTPRN-204ENST00000423636 AADATQ8N5Z0 425 aa11.46□□□□□ -0.58
PTPRN-204ENST00000423636 ARL10Q8N8L6 244 aa11.46□□□□□ -0.58
PTPRN-204ENST00000423636 OR14C36Q8NHC7 312 aa11.46□□□□□ -0.58
PTPRN-204ENST00000423636 DUS3LQ96G46 650 aaKnown RBP11.46□□□□□ -0.58
PTPRN-204ENST00000423636 GPATCH2Q9NW75 528 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms