RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 GPRC5BQ9NZH0 403 aa8.2□□□□□ -1.1
MDC1-204ENST00000422266 ABI3Q9P2A4 366 aa8.2□□□□□ -1.1
MDC1-204ENST00000422266 ZFP69BQ9UJL9 534 aa8.2□□□□□ -1.1
MDC1-204ENST00000422266 MRPS2Q9Y399 296 aaKnown RBP8.2□□□□□ -1.1
MDC1-204ENST00000422266 COPG1Q9Y678 874 aaKnown RBP8.2□□□□□ -1.1
MDC1-204ENST00000422266 NBASA2RRP1 2371 aa8.2□□□□□ -1.1
MDC1-204ENST00000422266 IGHV1-45A0A0A0MS14 117 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 NDUFS4O43181 175 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 RAD51CO43502 376 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 NRP2O60462 931 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 ZIC2O95409 532 aaPredicted RBP8.19□□□□□ -1.1
MDC1-204ENST00000422266 DDAH2O95865 285 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 S100BP04271 92 aaPredicted RBP8.19□□□□□ -1.1
MDC1-204ENST00000422266 PRR35P0CG20 571 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 COX6A1P12074 109 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 TSFMP43897 325 aaKnown RBP8.19□□□□□ -1.1
MDC1-204ENST00000422266 XCR1P46094 333 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 GLRBP48167 497 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 STXBP1P61764 594 aaKnown RBP8.19□□□□□ -1.1
MDC1-204ENST00000422266 YBX1P67809 324 aaKnown RBP8.19□□□□□ -1.1
MDC1-204ENST00000422266 RCN2Q14257 317 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 USP10Q14694 798 aaKnown RBP8.19□□□□□ -1.1
MDC1-204ENST00000422266 ZNF169Q14929 603 aaPredicted RBP8.19□□□□□ -1.1
MDC1-204ENST00000422266 PPP1R3AQ16821 1122 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 PLEKHN1Q494U1 663 aaPredicted RBP8.19□□□□□ -1.1
MDC1-204ENST00000422266 MINDY4Q4G0A6 757 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 GRTP1Q5TC63 336 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 RPUSD3Q6P087 351 aaKnown RBP8.19□□□□□ -1.1
MDC1-204ENST00000422266 TMEM205Q6UW68 189 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 SBSNQ6UWP8 590 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 ZNF572Q7Z3I7 529 aaPredicted RBP8.19□□□□□ -1.1
MDC1-204ENST00000422266 VN1R4Q7Z5H5 301 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 THOC6Q86W42 341 aaKnown RBP8.19□□□□□ -1.1
MDC1-204ENST00000422266 PRSS58Q8IYP2 241 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 KRT78Q8N1N4 520 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 ARMC2Q8NEN0 867 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 OR9A4Q8NGU2 314 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 HAS2Q92819 552 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 OLFM1Q99784 485 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 RNF32Q9H0A6 362 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 DPH5Q9H2P9 285 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 EHD1Q9H4M9 534 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 PLAC1Q9HBJ0 212 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 ZNF160Q9HCG1 818 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 CCDC88CQ9P219 2028 aa8.19□□□□□ -1.1
MDC1-204ENST00000422266 MYO18BQ8IUG5 2567 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 MDC1Q14676 2089 aaKnown RBP8.18□□□□□ -1.1
MDC1-204ENST00000422266 TRAV17A0A0B4J275 112 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 TCRBV9S1A1TA0A576 114 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 FEZF1A0PJY2 475 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 CLEC18AA5D8T8 446 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 KIF2AO00139 706 aaPredicted RBP8.18□□□□□ -1.1
MDC1-204ENST00000422266 PSMD12O00232 456 aaPredicted RBP8.18□□□□□ -1.1
MDC1-204ENST00000422266 CLGNO14967 610 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 TP73O15350 636 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 P2RX6O15547 441 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 KLHL18O94889 574 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 AGFG2O95081 481 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 MED26O95402 600 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 MLYCDO95822 493 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 SERPINA6P08185 405 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 F7P08709 466 aaPredicted RBP8.18□□□□□ -1.1
MDC1-204ENST00000422266 ALOX12P18054 663 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 IL1RNP18510 177 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 CRABP2P29373 138 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 PHBP35232 272 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 SCTRP47872 440 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 PLTPP55058 493 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 TAS2R39P59534 338 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 ARG2P78540 354 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 ACTN3Q08043 901 aaPredicted RBP8.18□□□□□ -1.1
MDC1-204ENST00000422266 TGM3Q08188 693 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 CDC16Q13042 620 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 LAPTM5Q13571 262 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 FASTKD3Q14CZ7 662 aaKnown RBP8.18□□□□□ -1.1
MDC1-204ENST00000422266 TGFBIQ15582 683 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 COLEC12Q5KU26 742 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 ABHD17BQ5VST6 288 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 PLAG1Q6DJT9 500 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 SULT1C3Q6IMI6 304 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 NXPE4Q6UWF7 544 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 FAM180AQ6UWF9 173 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 CLEC18BQ6UXF7 455 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 SYT10Q6XYQ8 523 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 MBOAT1Q6ZNC8 495 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 CPEB2Q7Z5Q1 589 aaKnown RBP8.18□□□□□ -1.1
MDC1-204ENST00000422266 TMPRSS11BQ86T26 416 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 LAPTM4BQ86VI4 370 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 GPSM1Q86YR5 675 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 PLD3Q8IV08 490 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 ZC3H7AQ8IWR0 971 aaKnown RBP8.18□□□□□ -1.1
MDC1-204ENST00000422266 CTAGE3PQ8IX95 158 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 KLHDC8AQ8IYD2 350 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 HORMAD2Q8N7B1 307 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 Q8NA96 180 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 CLEC18CQ8NCF0 446 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 PLPP5Q8NEB5 264 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 MNS1Q8NEH6 495 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 NT5CQ8TCD5 201 aa8.18□□□□□ -1.1
MDC1-204ENST00000422266 ADAMTS18Q8TE60 1221 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms