RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 TAS2R39P59534 338 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 MEF2AQ02078 507 aaPredicted RBP10.44□□□□□ -0.74
SSBP3-206ENST00000420121 PDIA2Q13087 525 aaKnown RBP10.44□□□□□ -0.74
SSBP3-206ENST00000420121 ZNF460Q14592 562 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 NDUFA9Q16795 377 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 CATSPEREQ5SY80 951 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 DUPD1Q68J44 220 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 HIST2H2BCQ6DN03 193 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 ISLR2Q6UXK2 745 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 LINC00696Q6ZRV3 163 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 LANCL3Q6ZV70 420 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 KBTBD2Q8IY47 623 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 AFAP1L2Q8N4X5 818 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 MFSD9Q8NBP5 474 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 ZNF740Q8NDX6 193 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 FBXO36Q8NEA4 188 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 CATSPER1Q8NEC5 780 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 GABPB2Q8TAK5 448 aaPredicted RBP10.44□□□□□ -0.74
SSBP3-206ENST00000420121 ZCCHC10Q8TBK6 192 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 DNAJB14Q8TBM8 379 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 BRIX1Q8TDN6 353 aaKnown RBP10.44□□□□□ -0.74
SSBP3-206ENST00000420121 ANKRD49Q8WVL7 239 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 MARVELD3Q96A59 401 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 ALKBH8Q96BT7 664 aaKnown RBP10.44□□□□□ -0.74
SSBP3-206ENST00000420121 VPS50Q96JG6 964 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 LMF1Q96S06 567 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 KRT12Q99456 494 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 YIPF2Q9BWQ6 316 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 SLC29A3Q9BZD2 475 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 PPANQ9NQ55 473 aaKnown RBP10.44□□□□□ -0.74
SSBP3-206ENST00000420121 ARL15Q9NXU5 204 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 MAP10Q9P2G4 905 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 MKL2Q9ULH7 1088 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 SNX24Q9Y343 169 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 COPG1Q9Y678 874 aaKnown RBP10.44□□□□□ -0.74
SSBP3-206ENST00000420121 CROCCQ5TZA2 2017 aa10.44□□□□□ -0.74
SSBP3-206ENST00000420121 CRYBG3Q68DQ2 2970 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 FAM95CA0A1B0GW59 222 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 EFCAB8A8MWE9 144 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 SGK494L7N484 410 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 CDC7O00311 574 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 PCDH17O14917 1159 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 DNAJB6O75190 326 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 RDH16O75452 317 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 AGFG2O95081 481 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 GUCA1CO95843 209 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 ENO2P09104 434 aaPredicted RBP10.43□□□□□ -0.74
SSBP3-206ENST00000420121 ITGAMP11215 1152 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 AVPR1BP47901 424 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 MGAT5Q09328 741 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 ZNF169Q14929 603 aaPredicted RBP10.43□□□□□ -0.74
SSBP3-206ENST00000420121 B3GNTL1Q67FW5 361 aaPredicted RBP10.43□□□□□ -0.74
SSBP3-206ENST00000420121 CAPN13Q6MZZ7 669 aaPredicted RBP10.43□□□□□ -0.74
SSBP3-206ENST00000420121 RIPOR1Q6ZS17 1223 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 ASPGQ86U10 573 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 CEP97Q8IW35 865 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 PALM2Q8IXS6 379 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 SIRT6Q8N6T7 355 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 CAMKVQ8NCB2 501 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 OR51Q1Q8NH59 317 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 SSC4DQ8WTU2 575 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 SLC13A3Q8WWT9 602 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 NEIL2Q969S2 332 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 PKNOX2Q96KN3 472 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 CYTH2Q99418 400 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 HAUS8Q9BT25 410 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 AICDAQ9GZX7 198 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 EPS8L2Q9H6S3 715 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 LANCL2Q9NS86 450 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 RIC8BQ9NVN3 520 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 GRHL1Q9NZI5 618 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 HCN3Q9P1Z3 774 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 PTGFRNQ9P2B2 879 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 ERRFI1Q9UJM3 462 aaPredicted RBP10.43□□□□□ -0.74
SSBP3-206ENST00000420121 SLC22A7Q9Y694 548 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 ITPR2Q14571 2701 aa10.43□□□□□ -0.74
SSBP3-206ENST00000420121 CELSR2Q9HCU4 2923 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 IGHV3-20A0A0C4DH32 117 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 TRBC2A0A5B9 178 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 NPEPPSL1A6NEC2 478 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 ANKUB1A6NFN9 424 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 CXorf49A8MYA2 514 aaPredicted RBP10.42□□□□□ -0.74
SSBP3-206ENST00000420121 C4orf51C9J302 202 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 B3GALT4O96024 378 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 LDLRP01130 860 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 CYC1P08574 325 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 HIST1H2AGP0C0S8 130 aaPredicted RBP10.42□□□□□ -0.74
SSBP3-206ENST00000420121 C8orf89P0DMQ9 161 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 HIST1H2ADP20671 130 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 CXCR2P25025 360 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 XCR1P46094 333 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 SCTRP47872 440 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 TNFSF10P50591 281 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 CCR8P51685 355 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 RHAGQ02094 409 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 HYAL2Q12891 473 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 TLR1Q15399 786 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 IRAK1BP1Q5VVH5 260 aa10.42□□□□□ -0.74
SSBP3-206ENST00000420121 ZNF324BQ6AW86 544 aaPredicted RBP10.42□□□□□ -0.74
SSBP3-206ENST00000420121 RPUSD3Q6P087 351 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms