RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 SLC44A3Q8N4M1 653 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 PLEKHO2Q8TD55 490 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 ING3Q9NXR8 418 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 AP1M2Q9Y6Q5 423 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 TRIM3O75382 744 aaPredicted RBP16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 ALDOAP04075 364 aaKnown RBP16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 SLC26A3P40879 764 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 STC1P52823 247 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 ARFIP1P53367 373 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 MEF2AQ02078 507 aaPredicted RBP16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 ZNF33BQ06732 778 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 TMEM130Q8N3G9 435 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 ESX1Q8N693 406 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 C1orf52Q8N6N3 182 aaKnown RBP16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 TDRD1Q9BXT4 1180 aaKnown RBP16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 ZNF304Q9HCX3 659 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 CMTM6Q9NX76 183 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 LYPLA1O75608 230 aaPredicted RBP16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 RORAP35398 523 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 RPS14P62263 151 aaKnown RBP16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 TNFAIP8L2Q6P589 184 aaPredicted RBP16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 TLDC1Q6P9B6 456 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 ANKRD7Q92527 254 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 CPNE7Q9UBL6 633 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 RCCD1A6NED2 376 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 TTLL8A6PVC2 850 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 BBIP1A8MTZ0 92 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 SEC14L5O43304 696 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 FAM153BP0C7A2 387 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 ANPEPP15144 967 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 EFNA1P20827 205 aaPredicted RBP16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 EPHA3P29320 983 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 PCBP2Q15366 365 aaKnown RBP eCLIP16.38■□□□□ 0.216e-7■■■■■ 31.2
SYNGAP1-202ENST00000418600 DEFB134Q4QY38 66 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 SLC9B1Q4ZJI4 515 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 PM20D1Q6GTS8 502 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 TMPPEQ6ZT21 453 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 EFHD2Q96C19 240 aaPredicted RBP16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 SPAG4Q9NPE6 437 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 KAT6AQ92794 2004 aa16.38■□□□□ 0.21
SYNGAP1-202ENST00000418600 JUNP05412 331 aaKnown RBP16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 TRAPPC9Q96Q05 1148 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 OR6C1Q96RD1 312 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 ZFYVE21Q9BQ24 234 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 GJE1A6NN92 205 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 ENO4A6NNW6 628 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 FARS2O95363 451 aaKnown RBP16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 AHSA1O95433 338 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 F11P03951 625 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 ENDOUP21128 410 aaKnown RBP16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 SLC6A4P31645 630 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 CCR10P46092 362 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 SLC6A9P48067 706 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 CXXC5Q7LFL8 322 aaKnown RBP16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 FAM110BQ8TC76 370 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 SAR1AQ9NR31 198 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 AGPAT4Q9NRZ5 378 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 A0A087WXM4 84 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 ZBTB11O95625 1053 aaPredicted RBP16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 LCN1P1Q5VSP4 162 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 RNF148Q8N7C7 305 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 ZSCAN4Q8NAM6 433 aaPredicted RBP16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 MAGEE2Q8TD90 523 aaPredicted RBP16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 TSEN15Q8WW01 171 aaKnown RBP16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 PTCD3Q96EY7 689 aaKnown RBP16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 CHMP1AQ9HD42 196 aaPredicted RBP16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 P2RX2Q9UBL9 471 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 DNASE1L1P49184 302 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 CORO7P57737 925 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 TSPAN33Q86UF1 283 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 TRIM73Q86UV7 250 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 IMP4Q96G21 291 aaKnown RBP16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 CDK15Q96Q40 435 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 TAF4O00268 1085 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 PEX14O75381 377 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 TTKP33981 857 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 TPMTP51580 245 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 CLRN1P58418 232 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 SIGLEC14Q08ET2 396 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 KIAA1191Q96A73 305 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 TRNT1Q96Q11 434 aaKnown RBP16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 SLC6A17Q9H1V8 727 aa16.37■□□□□ 0.21
SYNGAP1-202ENST00000418600 MAST2Q6P0Q8 1798 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 IFNW1P05000 195 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 IDH2P48735 452 aaKnown RBP16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 MOGSQ13724 837 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 PTCHD3Q3KNS1 767 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 C11orf65Q8NCR3 313 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 KCNE4Q8WWG9 221 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 C4orf47A7E2U8 309 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 ZNF208O43345 1280 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 MYL9P24844 172 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 DNM1P34Q6PK57 102 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 SH3YL1Q96HL8 342 aaPredicted RBP16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 DAPK2Q9UIK4 370 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 SAMHD1Q9Y3Z3 626 aaKnown RBP16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 TNRC6CQ9HCJ0 1690 aaKnown RBP16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 ICAM2P13598 275 aa16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 AK4P27144 223 aaPredicted RBP16.36■□□□□ 0.21
SYNGAP1-202ENST00000418600 OR2B6P58173 313 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms