RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 ZNF474Q6S9Z5 364 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 KDELC1Q6UW63 502 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 LINGO4Q6UY18 593 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 TRABD2AQ86V40 505 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 EXOC3L1Q86VI1 746 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 KCNMB4Q86W47 210 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 SLC26A11Q86WA9 606 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 LRRC6Q86X45 466 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 C4orf33Q8N1A6 199 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 RYBPQ8N488 228 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 TEX26Q8N6G2 289 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 PDCD6IPQ8WUM4 868 aaKnown RBP3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 SLC44A1Q8WWI5 657 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 USP13Q92995 863 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 WBP2Q969T9 261 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 RMDN1Q96DB5 314 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 MTBPQ96DY7 904 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 TCEAL4Q96EI5 215 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 IMP4Q96G21 291 aaKnown RBP3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 OXNAD1Q96HP4 312 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 APOPT1Q96IL0 206 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 FEM1CQ96JP0 617 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 RIPOR3Q96MK2 946 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 TSNARE1Q96NA8 513 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 CYP2S1Q96SQ9 504 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 CDCA3Q99618 268 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 PAIP2Q9BPZ3 127 aaKnown RBP3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 MGME1Q9BQP7 344 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 WDR83Q9BRX9 315 aaKnown RBP3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 FAM167BQ9BTA0 163 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 BBS2Q9BXC9 721 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 PDFQ9HBH1 243 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 C20orf96Q9NUD7 363 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 PSD3Q9NYI0 1048 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 PLK2Q9NYY3 685 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 TBC1D14Q9P2M4 693 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 STOML2Q9UJZ1 356 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 LAMP3Q9UQV4 416 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 KIAA0100Q14667 2235 aaKnown RBP3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 TICRRQ7Z2Z1 1910 aa3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 MUC22E2RYF6 1773 aaPredicted RBP3.74□□□□□ -1.81
HMGB3P20-201ENST00000417997 NOTCH4Q99466 2003 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 MAGEB16A2A368 324 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 ERICH4A6NGS2 130 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 FAM47DPA6NHR8 397 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 TRIM49D1C9J1S8 452 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 GOLGA8RI6L899 631 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 NDUFAB1O14561 156 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 COPEO14579 308 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 TIMM44O43615 452 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 SNAP91O60641 907 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 ATG13O75143 517 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 GLRA3O75311 464 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 PIAS1O75925 651 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZWINTO95229 277 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 KAT7O95251 611 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 PRAMEF12O95522 483 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 CER1O95813 267 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 ERVK-10P10266 1014 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 HOXB2P14652 356 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 NMBRP28336 390 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 GCAP28676 217 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 AKT1P31749 480 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 SPRP35270 261 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 CCR2P41597 374 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 POLD2P49005 469 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 SERPINB8P50452 374 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 CSE1LP55060 971 aaKnown RBP3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 AP1S1P61966 158 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 SNRPD1P62314 119 aaKnown RBP3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 SHC2P98077 582 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 PDE1BQ01064 536 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 IL9RQ01113 521 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 RAD51Q06609 339 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 CDK18Q07002 472 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 NIPAL4Q0D2K0 466 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 SLC12A1Q13621 1099 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 CAMK1Q14012 370 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 SLC1A5Q15758 541 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZNF77Q15935 545 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 UGP2Q16851 508 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 GLIPR1L2Q4G1C9 344 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 ANKRD20A4Q4UJ75 823 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 TAF1BQ53T94 588 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 SIRPB2Q5JXA9 342 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 MPP7Q5T2T1 576 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 ARMC3Q5W041 872 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 KIAA0930Q6ICG6 404 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 CES5AQ6NT32 575 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZNF449Q6P9G9 518 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 CES3Q6UWW8 571 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 PACS1Q6VY07 963 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 KDELC2Q7Z4H8 507 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 GLT6D1Q7Z4J2 308 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 PRPF39Q86UA1 669 aaKnown RBP3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 ARID3BQ8IVW6 561 aaPredicted RBP3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 FAM217AQ8IXS0 508 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 KLHDC8BQ8IXV7 354 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 PGBD5Q8N414 524 aa3.73□□□□□ -1.81
HMGB3P20-201ENST00000417997 CCDC63Q8NA47 563 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms