RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 TXNDC9O14530 226 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 KLHL41O60662 606 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 DNAJB6O75190 326 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 RDH16O75452 317 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 GUCA1CO95843 209 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 F10P00742 488 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 HEXBP07686 556 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 GLRBP48167 497 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 ARL4CP56559 192 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 TAS2R39P59534 338 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 IL2P60568 153 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 FRG1Q14331 258 aaKnown RBP14.28□□□□□ -0.12
UBXN4-203ENST00000416538 ZNF169Q14929 603 aaPredicted RBP14.28□□□□□ -0.12
UBXN4-203ENST00000416538 ASPGQ86U10 573 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 C17orf53Q8N3J3 647 aaPredicted RBP14.28□□□□□ -0.12
UBXN4-203ENST00000416538 MFSD9Q8NBP5 474 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 OR5T3Q8NGG3 340 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 PRR7Q8TB68 274 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 GRHL3Q8TE85 626 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 SSC4DQ8WTU2 575 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 ANKRD49Q8WVL7 239 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 NEIL2Q969S2 332 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 FBXL8Q96CD0 374 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 LRRC39Q96DD0 335 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 IMMP1LQ96LU5 166 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 KRT12Q99456 494 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 ZNF700Q9H0M5 742 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 PCBD2Q9H0N5 130 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 ARL15Q9NXU5 204 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 PLA2G3Q9NZ20 509 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 MOCS1Q9NZB8 636 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 PTGFRNQ9P2B2 879 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 CORO1CQ9ULV4 474 aaPredicted RBP14.28□□□□□ -0.12
UBXN4-203ENST00000416538 VWA7Q9Y334 891 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 SNX24Q9Y343 169 aa14.28□□□□□ -0.12
UBXN4-203ENST00000416538 CACNA1DQ01668 2161 aa14.27□□□□□ -0.12
UBXN4-203ENST00000416538 FAM95CA0A1B0GW59 222 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 EFCAB8A8MWE9 144 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 CCDC188H7C350 402 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 SEC24DO94855 1032 aaPredicted RBP14.27□□□□□ -0.13
UBXN4-203ENST00000416538 WISP3O95389 354 aaPredicted RBP14.27□□□□□ -0.13
UBXN4-203ENST00000416538 C1QAP02745 245 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 SERPINA7P05543 415 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 HRH2P25021 359 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 XCR1P46094 333 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 MGAT5Q09328 741 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 NDUFA9Q16795 377 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 C18orf21Q32NC0 220 aaPredicted RBP14.27□□□□□ -0.13
UBXN4-203ENST00000416538 IRAK1BP1Q5VVH5 260 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 DUPD1Q68J44 220 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 CAPN13Q6MZZ7 669 aaPredicted RBP14.27□□□□□ -0.13
UBXN4-203ENST00000416538 CAPN12Q6ZSI9 719 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 CEP97Q8IW35 865 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 KBTBD2Q8IY47 623 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 AFAP1L2Q8N4X5 818 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 OR4K1Q8NGD4 311 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 OR51Q1Q8NH59 317 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 DNAJB14Q8TBM8 379 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 THAP11Q96EK4 314 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 TSNARE1Q96NA8 513 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 SARGQ9BW04 601 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 AICDAQ9GZX7 198 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 EPS8L2Q9H6S3 715 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 RIC8BQ9NVN3 520 aa14.27□□□□□ -0.13
UBXN4-203ENST00000416538 COPG1Q9Y678 874 aaKnown RBP14.27□□□□□ -0.13
UBXN4-203ENST00000416538 MYO7BQ6PIF6 2116 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 A1L4Q6 167 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 ANKUB1A6NFN9 424 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 CXorf49A8MYA2 514 aaPredicted RBP14.26□□□□□ -0.13
UBXN4-203ENST00000416538 LDLRP01130 860 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 C8orf89P0DMQ9 161 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 SAT1P21673 171 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 CCND1P24385 295 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 VARSP26640 1264 aaKnown RBP14.26□□□□□ -0.13
UBXN4-203ENST00000416538 GMPRP36959 345 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 AVPR1BP47901 424 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 AP1S2P56377 157 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 OLR1P78380 273 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 REEP5Q00765 189 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 CBLBQ13191 982 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 STRA8Q7Z7C7 330 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 PALM2Q8IXS6 379 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 ANKRD53Q8N9V6 530 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 CAMKVQ8NCB2 501 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 SLC13A3Q8WWT9 602 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 TSLPQ969D9 159 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 PDLIM5Q96HC4 596 aaKnown RBP14.26□□□□□ -0.13
UBXN4-203ENST00000416538 VPS39Q96JC1 886 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 RUNDC3BQ96NL0 473 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 HS3ST6Q96QI5 342 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 TAAR6Q96RI8 345 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 HAUS8Q9BT25 410 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 UNKQ9C0B0 810 aaKnown RBP14.26□□□□□ -0.13
UBXN4-203ENST00000416538 DPH5Q9H2P9 285 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 LRRC4CQ9HCJ2 640 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 LANCL2Q9NS86 450 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 GRHL1Q9NZI5 618 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 ZFATQ9P243 1243 aa14.26□□□□□ -0.13
UBXN4-203ENST00000416538 PLEKHB1Q9UF11 243 aaPredicted RBP14.26□□□□□ -0.13
UBXN4-203ENST00000416538 NAALAD2Q9Y3Q0 740 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms