RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 A0A0A6YYC8 382 aaPredicted RBP24.05■■□□□ 1.44
CPNE1-207ENST00000414664 I3L1I5 382 aaPredicted RBP24.05■■□□□ 1.44
CPNE1-207ENST00000414664 FOXS1O43638 330 aa24.05■■□□□ 1.44
CPNE1-207ENST00000414664 CNOT3O75175 753 aaKnown RBP24.05■■□□□ 1.44
CPNE1-207ENST00000414664 STATHP02808 62 aa24.05■■□□□ 1.44
CPNE1-207ENST00000414664 GFAPP14136 432 aa24.05■■□□□ 1.44
CPNE1-207ENST00000414664 VARSP26640 1264 aaKnown RBP24.05■■□□□ 1.44
CPNE1-207ENST00000414664 POLE2P56282 527 aa24.05■■□□□ 1.44
CPNE1-207ENST00000414664 RGS1Q08116 209 aa24.05■■□□□ 1.44
CPNE1-207ENST00000414664 DSG2Q14126 1118 aa24.05■■□□□ 1.44
CPNE1-207ENST00000414664 FBXO48Q5FWF7 155 aa24.05■■□□□ 1.44
CPNE1-207ENST00000414664 FAM69BQ5VUD6 431 aa24.05■■□□□ 1.44
CPNE1-207ENST00000414664 TMEM214Q6NUQ4 689 aaKnown RBP24.05■■□□□ 1.44
CPNE1-207ENST00000414664 DTWD1Q8N5C7 304 aa24.05■■□□□ 1.44
CPNE1-207ENST00000414664 UBTD2Q8WUN7 234 aa24.05■■□□□ 1.44
CPNE1-207ENST00000414664 NACC2Q96BF6 587 aa24.05■■□□□ 1.44
CPNE1-207ENST00000414664 PPCSQ9HAB8 311 aa24.05■■□□□ 1.44
CPNE1-207ENST00000414664 OPTCQ9UBM4 332 aa24.05■■□□□ 1.44
CPNE1-207ENST00000414664 H0YIG0 161 aa24.04■■□□□ 1.44
CPNE1-207ENST00000414664 NDUFS4O43181 175 aa24.04■■□□□ 1.44
CPNE1-207ENST00000414664 SERPIND1P05546 499 aa24.04■■□□□ 1.44
CPNE1-207ENST00000414664 MTHFD2P13995 350 aa24.04■■□□□ 1.44
CPNE1-207ENST00000414664 OTX2P32243 289 aa24.04■■□□□ 1.44
CPNE1-207ENST00000414664 ALDH18A1P54886 795 aaKnown RBP24.04■■□□□ 1.44
CPNE1-207ENST00000414664 LY6DQ14210 128 aa24.04■■□□□ 1.44
CPNE1-207ENST00000414664 TECRLQ5HYJ1 363 aa24.04■■□□□ 1.44
CPNE1-207ENST00000414664 PLD6Q8N2A8 252 aaKnown RBP24.04■■□□□ 1.44
CPNE1-207ENST00000414664 KCT2Q8NC54 265 aa24.04■■□□□ 1.44
CPNE1-207ENST00000414664 TTLQ8NG68 377 aa24.04■■□□□ 1.44
CPNE1-207ENST00000414664 NT5CQ8TCD5 201 aa24.04■■□□□ 1.44
CPNE1-207ENST00000414664 MIEF2Q96C03 454 aa24.04■■□□□ 1.44
CPNE1-207ENST00000414664 SCYL1Q96KG9 808 aa24.04■■□□□ 1.44
CPNE1-207ENST00000414664 MACROD1Q9BQ69 325 aa24.04■■□□□ 1.44
CPNE1-207ENST00000414664 YIPF2Q9BWQ6 316 aa24.04■■□□□ 1.44
CPNE1-207ENST00000414664 SPNS1Q9H2V7 528 aa24.04■■□□□ 1.44
CPNE1-207ENST00000414664 NT5DC2Q9H857 520 aa24.04■■□□□ 1.44
CPNE1-207ENST00000414664 ANKHQ9HCJ1 492 aa24.04■■□□□ 1.44
CPNE1-207ENST00000414664 GEMIN8Q9NWZ8 242 aaKnown RBP24.04■■□□□ 1.44
CPNE1-207ENST00000414664 TUBD1Q9UJT1 453 aa24.04■■□□□ 1.44
CPNE1-207ENST00000414664 TMCO1Q9UM00 188 aa24.04■■□□□ 1.44
CPNE1-207ENST00000414664 SLC22A7Q9Y694 548 aa24.04■■□□□ 1.44
CPNE1-207ENST00000414664 URADA6NGE7 173 aa24.03■■□□□ 1.44
CPNE1-207ENST00000414664 VSTM2BA6NLU5 285 aa24.03■■□□□ 1.44
CPNE1-207ENST00000414664 K7EPI3 171 aa24.03■■□□□ 1.44
CPNE1-207ENST00000414664 NSA2O95478 260 aaKnown RBP24.03■■□□□ 1.44
CPNE1-207ENST00000414664 IGHEP01854 428 aa24.03■■□□□ 1.44
CPNE1-207ENST00000414664 FAM87AP0C7U9 286 aa24.03■■□□□ 1.44
CPNE1-207ENST00000414664 GSTM2P28161 218 aa24.03■■□□□ 1.44
CPNE1-207ENST00000414664 VSNL1P62760 191 aa24.03■■□□□ 1.44
CPNE1-207ENST00000414664 SKP1P63208 163 aa24.03■■□□□ 1.44
CPNE1-207ENST00000414664 LAPTM5Q13571 262 aa24.03■■□□□ 1.44
CPNE1-207ENST00000414664 XKR6Q5GH73 641 aa24.03■■□□□ 1.44
CPNE1-207ENST00000414664 NIPAL1Q6NVV3 410 aa24.03■■□□□ 1.44
CPNE1-207ENST00000414664 WDR93Q6P2C0 686 aa24.03■■□□□ 1.44
CPNE1-207ENST00000414664 TMIGD1Q6UXZ0 262 aa24.03■■□□□ 1.44
CPNE1-207ENST00000414664 APLFQ8IW19 511 aaPredicted RBP24.03■■□□□ 1.44
CPNE1-207ENST00000414664 EXD3Q8N9H8 876 aa24.03■■□□□ 1.44
CPNE1-207ENST00000414664 STT3BQ8TCJ2 826 aa24.03■■□□□ 1.44
CPNE1-207ENST00000414664 PTCD3Q96EY7 689 aaKnown RBP24.03■■□□□ 1.44
CPNE1-207ENST00000414664 SEC16BQ96JE7 1060 aa24.03■■□□□ 1.44
CPNE1-207ENST00000414664 SPSB2Q99619 263 aa24.03■■□□□ 1.44
CPNE1-207ENST00000414664 MKKSQ9NPJ1 570 aaPredicted RBP24.03■■□□□ 1.44
CPNE1-207ENST00000414664 TRPC4Q9UBN4 977 aa24.03■■□□□ 1.44
CPNE1-207ENST00000414664 CTSFQ9UBX1 484 aa24.03■■□□□ 1.44
CPNE1-207ENST00000414664 MAP4K5Q9Y4K4 846 aa24.03■■□□□ 1.44
CPNE1-207ENST00000414664 TNPO3Q9Y5L0 923 aaKnown RBP24.03■■□□□ 1.44
CPNE1-207ENST00000414664 IGLV3-12A0A075B6K2 115 aa24.02■■□□□ 1.44
CPNE1-207ENST00000414664 PEX12O00623 359 aa24.02■■□□□ 1.44
CPNE1-207ENST00000414664 KLK8O60259 260 aa24.02■■□□□ 1.44
CPNE1-207ENST00000414664 RFPL1O75677 317 aa24.02■■□□□ 1.44
CPNE1-207ENST00000414664 RRADP55042 308 aa24.02■■□□□ 1.44
CPNE1-207ENST00000414664 IRF8Q02556 426 aa24.02■■□□□ 1.44
CPNE1-207ENST00000414664 SLBPQ14493 270 aaKnown RBP eCLIP24.02■■□□□ 1.44
CPNE1-207ENST00000414664 HERC3Q15034 1050 aa24.02■■□□□ 1.44
CPNE1-207ENST00000414664 SETDB1Q15047 1291 aa24.02■■□□□ 1.44
CPNE1-207ENST00000414664 HIST2H2ACQ16777 129 aaPredicted RBP24.02■■□□□ 1.44
CPNE1-207ENST00000414664 PFKFB4Q16877 469 aa24.02■■□□□ 1.44
CPNE1-207ENST00000414664 PAGE2BQ5JRK9 111 aa24.02■■□□□ 1.44
CPNE1-207ENST00000414664 HIST2H2AA3Q6FI13 130 aa24.02■■□□□ 1.44
CPNE1-207ENST00000414664 MED25Q71SY5 747 aa24.02■■□□□ 1.44
CPNE1-207ENST00000414664 LCA5Q86VQ0 697 aa24.02■■□□□ 1.44
CPNE1-207ENST00000414664 ANKRD53Q8N9V6 530 aa24.02■■□□□ 1.44
CPNE1-207ENST00000414664 OR9A4Q8NGU2 314 aa24.02■■□□□ 1.44
CPNE1-207ENST00000414664 ZCCHC10Q8TBK6 192 aa24.02■■□□□ 1.44
CPNE1-207ENST00000414664 WDR34Q96EX3 536 aa24.02■■□□□ 1.44
CPNE1-207ENST00000414664 VPS50Q96JG6 964 aa24.02■■□□□ 1.44
CPNE1-207ENST00000414664 EFCAB11Q9BUY7 163 aa24.02■■□□□ 1.44
CPNE1-207ENST00000414664 SOX17Q9H6I2 414 aaPredicted RBP24.02■■□□□ 1.44
CPNE1-207ENST00000414664 SEMA3GQ9NS98 782 aa24.02■■□□□ 1.44
CPNE1-207ENST00000414664 C14orf105Q9NVL8 296 aa24.02■■□□□ 1.44
CPNE1-207ENST00000414664 ZNF358Q9NW07 568 aa24.02■■□□□ 1.44
CPNE1-207ENST00000414664 CPSF2Q9P2I0 782 aaKnown RBP24.02■■□□□ 1.44
CPNE1-207ENST00000414664 MRPS2Q9Y399 296 aaKnown RBP24.02■■□□□ 1.44
CPNE1-207ENST00000414664 ANGPTL3Q9Y5C1 460 aa24.02■■□□□ 1.44
CPNE1-207ENST00000414664 CCDC88CQ9P219 2028 aa24.01■■□□□ 1.43
CPNE1-207ENST00000414664 IGSF10Q6WRI0 2623 aa24.01■■□□□ 1.43
CPNE1-207ENST00000414664 ARGFXA6NJG6 315 aa24.01■■□□□ 1.43
CPNE1-207ENST00000414664 UMODP07911 640 aa24.01■■□□□ 1.43
CPNE1-207ENST00000414664 ZGLP1P0C6A0 271 aa24.01■■□□□ 1.43
CPNE1-207ENST00000414664 EPB42P16452 691 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms