RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 TAPBPO15533 448 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 ACSL3O95573 720 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 SERPIND1P05546 499 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 SLC35G6P0C7Q6 338 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 IL1RNP18510 177 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 CASRP41180 1078 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 SLC6A12P48065 614 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 KCNC1P48547 511 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 TLE1Q04724 770 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 FBXO48Q5FWF7 155 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 NXPE4Q6UWF7 544 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 TMPRSS11BQ86T26 416 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 SHISA5Q8N114 240 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 GALNT16Q8N428 558 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 TBC1D19Q8N5T2 526 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 EXT2Q93063 718 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 KIAA1191Q96A73 305 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 ESAMQ96AP7 390 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 CYTH2Q99418 400 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 TSPYL1Q9H0U9 437 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 EPN3Q9H201 632 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 ACSS3Q9H6R3 686 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 PELI2Q9HAT8 420 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 ATP13A2Q9NQ11 1180 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 CD274Q9NZQ7 290 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 RNF112Q9ULX5 631 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 ZNF451Q9Y4E5 1061 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 KCNE2Q9Y6J6 123 aa14.05□□□□□ -0.16
LIMS4-201ENST00000413601 BAHCC1Q9P281 2608 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 IDSB3KWA1 339 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 H0YIG0 161 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 SGK494L7N484 410 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 NDUFS4O43181 175 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 NSA2O95478 260 aaKnown RBP14.04□□□□□ -0.16
LIMS4-201ENST00000413601 TFEBP19484 476 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 VARSP26640 1264 aaKnown RBP14.04□□□□□ -0.16
LIMS4-201ENST00000413601 CRABP2P29373 138 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 SCTRP47872 440 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 EMP2P54851 167 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 REEP5Q00765 189 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 AIMP2Q13155 320 aaKnown RBP14.04□□□□□ -0.16
LIMS4-201ENST00000413601 TUBB8Q3ZCM7 444 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 FAAH2Q6GMR7 532 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 TBC1D1Q86TI0 1168 aaPredicted RBP14.04□□□□□ -0.16
LIMS4-201ENST00000413601 PDSS2Q86YH6 399 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 ZC3H7AQ8IWR0 971 aaKnown RBP14.04□□□□□ -0.16
LIMS4-201ENST00000413601 KLHDC8AQ8IYD2 350 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 TCAIMQ8N3R3 496 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 ANKRD53Q8N9V6 530 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 OR11G2Q8NGC1 345 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 C8orf44Q96CB5 159 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 SMAD5Q99717 465 aaKnown RBP14.04□□□□□ -0.16
LIMS4-201ENST00000413601 AIF1LQ9BQI0 150 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 TMEM79Q9BSE2 394 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 TGIF2Q9GZN2 237 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 ALG9Q9H6U8 611 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 NMRAL1Q9HBL8 299 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 ANKHQ9HCJ1 492 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 IGSF5Q9NSI5 407 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 C14orf105Q9NVL8 296 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 WWOXQ9NZC7 414 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 HCN3Q9P1Z3 774 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 ZFP69BQ9UJL9 534 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 NAALAD2Q9Y3Q0 740 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 PCDHGB7Q9Y5F8 929 aa14.04□□□□□ -0.16
LIMS4-201ENST00000413601 GCN1Q92616 2671 aaKnown RBP14.04□□□□□ -0.16
LIMS4-201ENST00000413601 RDH16O75452 317 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 JRKO75564 520 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 BMP10O95393 424 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 HEXBP07686 556 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 LTA4HP09960 611 aaKnown RBP14.03□□□□□ -0.16
LIMS4-201ENST00000413601 C1GALT1C1LP0DN25 315 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 ACPPP15309 386 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 GNAZP19086 355 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 ITGA3P26006 1051 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 AHRP35869 848 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 GGT5P36269 586 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 HSPA7P48741 367 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 IRF9Q00978 393 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 PWP1Q13610 501 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 MYBPC3Q14896 1274 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 RBBP5Q15291 538 aaKnown RBP14.03□□□□□ -0.16
LIMS4-201ENST00000413601 NADK2Q4G0N4 442 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 CDKL4Q5MAI5 379 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 ATG9BQ674R7 924 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 SULT1C3Q6IMI6 304 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 SLCO4C1Q6ZQN7 724 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 ISCA2Q86U28 154 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 PARP9Q8IXQ6 854 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 PDPRQ8NCN5 879 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 OR51Q1Q8NH59 317 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 STAG3L4Q8TBR4 150 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 NXNL1Q96CM4 212 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 CNOT10Q9H9A5 744 aaKnown RBP14.03□□□□□ -0.16
LIMS4-201ENST00000413601 SNX15Q9NRS6 342 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 PTBP2Q9UKA9 531 aaKnown RBP14.03□□□□□ -0.16
LIMS4-201ENST00000413601 MKL2Q9ULH7 1088 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 NFU1Q9UMS0 254 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 ACOT9Q9Y305 439 aa14.03□□□□□ -0.16
LIMS4-201ENST00000413601 SLC22A7Q9Y694 548 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms