RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 AQP9O43315 295 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 ANGPTL7O43827 346 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 MRPS14O60783 128 aaKnown RBP-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 VPS4BO75351 444 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 PRPF40AO75400 957 aaKnown RBP-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 SERPINB7O75635 380 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 VNN1O95497 513 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 CLDN1O95832 211 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 CLPTM1O96005 669 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 C1QAP02745 245 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 MMP1P03956 469 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 HPNP05981 417 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 ADRB2P07550 413 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZNF705DP0CH99 300 aaPredicted RBP-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZNF705BP0CI00 300 aaPredicted RBP-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 SLC35E2P0CK97 266 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 OR12D1P0DN82 309 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 CDH1P12830 882 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 GOT1P17174 413 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 UQCRC2P22695 453 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 MAPK3P27361 379 aaPredicted RBP-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 RBL1P28749 1068 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 UGT1A5P35504 534 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 RPL13AP40429 203 aaKnown RBP-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 MDH2P40926 338 aaKnown RBP-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 CRKLP46109 303 aaKnown RBP-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 TRPC1P48995 793 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 SLC11A2P49281 568 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 TOB1P50616 345 aaPredicted RBP-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 CASP9P55211 416 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZNF33AQ06730 810 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 TSPAN31Q12999 210 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 SPCS2Q15005 226 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 HERPUD1Q15011 391 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 SURF2Q15527 256 aaPredicted RBP-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 PSG3Q16557 428 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 SLC5A9Q2M3M2 681 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZNF394Q53GI3 561 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 TECRLQ5HYJ1 363 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 LDLRAD2Q5SZI1 272 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 LIPMQ5VYY2 423 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 WDR73Q6P4I2 378 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZNF474Q6S9Z5 364 aaPredicted RBP-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZNF322Q6U7Q0 402 aaPredicted RBP-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 UNQ9165/PRO28630Q6UXU0 137 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 Q6ZS49 121 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 TADA2BQ86TJ2 420 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 TTC7BQ86TV6 843 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 COA5Q86WW8 74 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 PASD1Q8IV76 773 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZDHHC23Q8IYP9 409 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 AQP11Q8NBQ7 271 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 OR4D9Q8NGE8 314 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 ANGPTL6Q8NI99 470 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 SETD6Q8TBK2 473 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 BRSK1Q8TDC3 778 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 SDR42E1Q8WUS8 393 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 TFB1MQ8WVM0 346 aaKnown RBP-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 GLMPQ8WWB7 406 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 HOXB13Q92826 284 aaPredicted RBP-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 SCAMP4Q969E2 229 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 SCRN2Q96FV2 425 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 SLC2A13Q96QE2 648 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 TTLL2Q9BWV7 592 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZNF471Q9BX82 626 aaPredicted RBP-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 OSBPL10Q9BXB5 764 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 DGCR6LQ9BY27 220 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 PITPNM3Q9BZ71 974 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 PCDHAC1Q9H158 963 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 RAD21L1Q9H4I0 556 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 ACAD9Q9H845 621 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 POPDC2Q9HBU9 364 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 SPACA1Q9HBV2 294 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 IL1RAPQ9NPH3 570 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 DCAF13Q9NV06 445 aaKnown RBP-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 FBXO28Q9NVF7 368 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 PAG1Q9NWQ8 432 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 BABAM2Q9NXR7 383 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 MRPL27Q9P0M9 148 aaKnown RBP-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 KLHL9Q9P2J3 617 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 ONECUT1Q9UBC0 465 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 CRNNQ9UBG3 495 aaPredicted RBP-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 PPP1R1BQ9UD71 204 aaPredicted RBP-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 RSPH14Q9UHP6 348 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 ATP6V1HQ9UI12 483 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 INPP5FQ9Y2H2 1132 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 ACOT9Q9Y305 439 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 PFASO15067 1338 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 IL16Q14005 1332 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 SPATA31A1Q5TZJ5 1347 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 KNTC1P50748 2209 aa-1.78□□□□□ -2.69
RNU4-88P-201ENST00000411220 SZT2Q5T011 3432 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 RP1P56715 2156 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 GLI3P10071 1580 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 PARD3Q8TEW0 1356 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 LOC105371045A0A1W2PR82 267 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 A6NDX4 124 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 ALG1L2C9J202 215 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 E9PSI1 815 aa-1.79□□□□□ -2.7
RNU4-88P-201ENST00000411220 TNPO2O14787 897 aaKnown RBP-1.79□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms