RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 SLBPQ14493 270 aaKnown RBP eCLIP13.07□□□□□ -0.32
LIMS1-205ENST00000410093 STARD3Q14849 445 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 VMACQ2NL98 169 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 CCSMST1Q4G0I0 132 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.07□□□□□ -0.32
LIMS1-205ENST00000410093 AGBL4Q5VU57 503 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 IYDQ6PHW0 289 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 DOK6Q6PKX4 331 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 USP51Q70EK9 711 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 HEATR4Q86WZ0 1026 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 METTL4Q8N3J2 472 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 LILRA3Q8N6C8 439 aaPredicted RBP13.07□□□□□ -0.32
LIMS1-205ENST00000410093 C1orf52Q8N6N3 182 aaKnown RBP13.07□□□□□ -0.32
LIMS1-205ENST00000410093 OR5K1Q8NHB7 308 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 SNX19Q92543 992 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 TFGQ92734 400 aaPredicted RBP13.07□□□□□ -0.32
LIMS1-205ENST00000410093 EDAQ92838 391 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 FAM131CQ96AQ9 280 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 NRBF2Q96F24 287 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 QRFPRQ96P65 431 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 TRMT61BQ9BVS5 477 aaKnown RBP13.07□□□□□ -0.32
LIMS1-205ENST00000410093 ASPSCR1Q9BZE9 553 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 RHBGQ9H310 441 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 TRIT1Q9H3H1 467 aaKnown RBP13.07□□□□□ -0.32
LIMS1-205ENST00000410093 IKZF5Q9H5V7 419 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 REEP4Q9H6H4 257 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 NTN4Q9HB63 628 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 MYNNQ9NPC7 610 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 SUFUQ9UMX1 484 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 PCDHGB4Q9UN71 923 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 ASF1AQ9Y294 204 aa13.07□□□□□ -0.32
LIMS1-205ENST00000410093 DOCK8Q8NF50 2099 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 GNG14A0A1W2PPG7 69 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 GNGT2O14610 69 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 ALPLP05186 524 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 IDSP22304 550 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 PAX7P23759 505 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 GSTM2P28161 218 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 DRD3P35462 400 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 RPS13P62277 151 aaKnown RBP13.06□□□□□ -0.32
LIMS1-205ENST00000410093 RAE1P78406 368 aaKnown RBP13.06□□□□□ -0.32
LIMS1-205ENST00000410093 ADARB1P78563 741 aaKnown RBP13.06□□□□□ -0.32
LIMS1-205ENST00000410093 PLIN5Q00G26 463 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 IL18R1Q13478 541 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 DDX39BQ13838 428 aaKnown RBP13.06□□□□□ -0.32
LIMS1-205ENST00000410093 ZC3H12BQ5HYM0 836 aaKnown RBP13.06□□□□□ -0.32
LIMS1-205ENST00000410093 FOXB2Q5VYV0 432 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 EGFLAMQ63HQ2 1017 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 SDE2Q6IQ49 451 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 TTC33Q6PID6 262 aaPredicted RBP13.06□□□□□ -0.32
LIMS1-205ENST00000410093 GPR155Q7Z3F1 870 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 SLC30A8Q8IWU4 369 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 CHPFQ8IZ52 775 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 FAM47BQ8NA70 645 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 MAGEE2Q8TD90 523 aaPredicted RBP13.06□□□□□ -0.32
LIMS1-205ENST00000410093 ASB12Q8WXK4 309 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 SMPDL3AQ92484 453 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 TMBIM1Q969X1 311 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 EGLN2Q96KS0 407 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 AIF1LQ9BQI0 150 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 TIMM29Q9BSF4 260 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 INPP5KQ9BT40 448 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 USP22Q9UPT9 525 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 ORC6Q9Y5N6 252 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 TRPM6Q9BX84 2022 aa13.06□□□□□ -0.32
LIMS1-205ENST00000410093 GABRR3A8MPY1 467 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 C2CD4DB7Z1M9 353 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 PDLIM1O00151 329 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 UPK1AO00322 258 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 TBX19O60806 448 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 PRKD3O94806 890 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 PCDH8O95206 1070 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 LRATO95237 230 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 SERPINA1P01009 418 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 SLC35G4P0C7Q5 338 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 THRBP10828 461 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 ENGP17813 658 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 ESRRGP62508 458 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 ZXDAP98168 799 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 RBBP4Q09028 425 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 FADDQ13158 208 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 PDE7AQ13946 482 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 NFE2L1Q14494 772 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 RBBP5Q15291 538 aaKnown RBP13.05□□□□□ -0.32
LIMS1-205ENST00000410093 CYBRD1Q53TN4 286 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 THEMIS2Q5TEJ8 643 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 CRTC3Q6UUV7 619 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 XKR5Q6UX68 686 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 TMIGD1Q6UXZ0 262 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 DNAJC14Q6Y2X3 702 aaPredicted RBP13.05□□□□□ -0.32
LIMS1-205ENST00000410093 ZNF621Q6ZSS3 439 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 PAGE2Q7Z2X7 111 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 TRIM74Q86UV6 250 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 C17orf64Q86WR6 236 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 CLEC4FQ8N1N0 589 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 ZNF513Q8N8E2 541 aaPredicted RBP13.05□□□□□ -0.32
LIMS1-205ENST00000410093 PJA1Q8NG27 643 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 OR7A2PQ8NGA2 310 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 FBXO30Q8TB52 745 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms