RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 MED27Q6P2C8 311 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 CEACAM20Q6UY09 585 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 BPHLQ86WA6 291 aaPredicted RBP13.71□□□□□ -0.21
LIMS2-209ENST00000410038 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.71□□□□□ -0.21
LIMS2-209ENST00000410038 LAS2Q8IYD9 372 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 GATA6Q92908 595 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 USP7Q93009 1102 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 RERGQ96A58 199 aaPredicted RBP13.71□□□□□ -0.21
LIMS2-209ENST00000410038 SHCBP1LQ9BZQ2 653 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 NRSN2Q9GZP1 204 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 TNFRSF12AQ9NP84 129 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 ENAMQ9NRM1 1142 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 INTS9Q9NV88 658 aaKnown RBP13.71□□□□□ -0.21
LIMS2-209ENST00000410038 TRPS1Q9UHF7 1281 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 MSRB2Q9Y3D2 182 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 B3GALT1Q9Y5Z6 326 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 CHD6Q8TD26 2715 aa13.71□□□□□ -0.21
LIMS2-209ENST00000410038 TRABD2BA6NFA1 517 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 C9orf172C9J069 976 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 P2RX6O15547 441 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 TIAF1O95411 115 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 GRK2P25098 689 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 SERPINB5P36952 375 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 CYP4F2P78329 520 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 GALNT1Q10472 559 aaPredicted RBP13.7□□□□□ -0.22
LIMS2-209ENST00000410038 HKDC1Q2TB90 917 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.7□□□□□ -0.22
LIMS2-209ENST00000410038 PRAMEF17Q5VTA0 474 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 PWWP2BQ6NUJ5 590 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 ASPGQ86U10 573 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 GPR135Q8IZ08 494 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 CSNK1A1LQ8N752 337 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 CDYL2Q8N8U2 506 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 SLC13A3Q8WWT9 602 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 UBE2E3Q969T4 207 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 MAGEB10Q96LZ2 347 aaPredicted RBP13.7□□□□□ -0.22
LIMS2-209ENST00000410038 SLC46A1Q96NT5 459 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 KCNA7Q96RP8 456 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 MACROD1Q9BQ69 325 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 DDA1Q9BW61 102 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 TMEM121BQ9BXQ6 578 aaPredicted RBP13.7□□□□□ -0.22
LIMS2-209ENST00000410038 ASPSCR1Q9BZE9 553 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 RHBGQ9H310 441 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 ZNF395Q9H8N7 513 aaPredicted RBP13.7□□□□□ -0.22
LIMS2-209ENST00000410038 IRAK4Q9NWZ3 460 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 PCDHGA3Q9Y5H0 932 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 PCDHGA11Q9Y5H2 935 aa13.7□□□□□ -0.22
LIMS2-209ENST00000410038 ANKDD1BA6NHY2 528 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 FFAR3O14843 346 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 GPR42O15529 346 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 ZSCAN9O15535 394 aaPredicted RBP13.69□□□□□ -0.22
LIMS2-209ENST00000410038 ITM2AO43736 263 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 SERPIND1P05546 499 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 CAPN1P07384 714 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 GSTM2P28161 218 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 ATP1A2P50993 1020 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 BST1Q10588 318 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 COL9A2Q14055 689 aaPredicted RBP13.69□□□□□ -0.22
LIMS2-209ENST00000410038 RTP5Q14D33 572 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 PRTGQ2VWP7 1150 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 VN1R5Q7Z5H4 357 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 CUZD1Q86UP6 607 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 ZNF655Q8N720 491 aaPredicted RBP13.69□□□□□ -0.22
LIMS2-209ENST00000410038 TRPV3Q8NET8 790 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 TTLQ8NG68 377 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 WDR20Q8TBZ3 569 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 CREB3L4Q8TEY5 395 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 RNF31Q96EP0 1072 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 TEFMQ96QE5 360 aaKnown RBP13.69□□□□□ -0.22
LIMS2-209ENST00000410038 ZPBPQ9BS86 351 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 C20orf27Q9GZN8 174 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 RUVBL1Q9Y265 456 aaKnown RBP13.69□□□□□ -0.22
LIMS2-209ENST00000410038 TSC22D4Q9Y3Q8 395 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 CELSR3Q9NYQ7 3312 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 FITM1A5D6W6 292 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 TMEM114B3SHH9 223 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 TXNDC9O14530 226 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 NDUFS4O43181 175 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 LYPLA1O75608 230 aaPredicted RBP13.69□□□□□ -0.22
LIMS2-209ENST00000410038 SCRG1O75711 98 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 TBX6O95947 436 aaPredicted RBP13.69□□□□□ -0.22
LIMS2-209ENST00000410038 ENO1P06733 434 aaKnown RBP13.69□□□□□ -0.22
LIMS2-209ENST00000410038 SLC35G6P0C7Q6 338 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 PCNAP12004 261 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 ZNF28P17035 718 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 GCGRP47871 477 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 NEK2P51955 445 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 FOXA1P55317 472 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 ABCE1P61221 599 aaKnown RBP13.69□□□□□ -0.22
LIMS2-209ENST00000410038 STX3Q13277 289 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 PWP1Q13610 501 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 GRM7Q14831 915 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 TCHHL1Q5QJ38 904 aaPredicted RBP13.69□□□□□ -0.22
LIMS2-209ENST00000410038 TMEM164Q5U3C3 297 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 FRG2Q64ET8 278 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 TTC19Q6DKK2 380 aaPredicted RBP13.69□□□□□ -0.22
LIMS2-209ENST00000410038 TLDC1Q6P9B6 456 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 IGF2-ASQ6U949 168 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 TMEM126BQ8IUX1 230 aa13.69□□□□□ -0.22
LIMS2-209ENST00000410038 RNF175Q8N4F7 328 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms