RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 NPAS3Q8IXF0 933 aa16.1■□□□□ 0.17
LIMS2-208ENST00000410011 UBE2FQ969M7 185 aa16.1■□□□□ 0.17
LIMS2-208ENST00000410011 NXF2Q9GZY0 626 aaKnown RBP16.1■□□□□ 0.17
LIMS2-208ENST00000410011 MRPL17Q9NRX2 175 aaKnown RBP16.1■□□□□ 0.17
LIMS2-208ENST00000410011 TRIM17Q9Y577 477 aa16.1■□□□□ 0.17
LIMS2-208ENST00000410011 LYVE1Q9Y5Y7 322 aa16.1■□□□□ 0.17
LIMS2-208ENST00000410011 CLCA1A8K7I4 914 aa16.09■□□□□ 0.17
LIMS2-208ENST00000410011 RFPL2O75678 378 aa16.09■□□□□ 0.17
LIMS2-208ENST00000410011 IDSP22304 550 aa16.09■□□□□ 0.17
LIMS2-208ENST00000410011 HOXD10P28358 340 aa16.09■□□□□ 0.17
LIMS2-208ENST00000410011 ALDH4A1P30038 563 aa16.09■□□□□ 0.17
LIMS2-208ENST00000410011 EIF2DP41214 584 aaKnown RBP16.09■□□□□ 0.17
LIMS2-208ENST00000410011 MAPK9P45984 424 aa16.09■□□□□ 0.17
LIMS2-208ENST00000410011 ZNF404Q494X3 552 aa16.09■□□□□ 0.17
LIMS2-208ENST00000410011 TSEN54Q7Z6J9 526 aaKnown RBP16.09■□□□□ 0.17
LIMS2-208ENST00000410011 BBS7Q8IWZ6 715 aa16.09■□□□□ 0.17
LIMS2-208ENST00000410011 DNAJC22Q8N4W6 341 aa16.09■□□□□ 0.17
LIMS2-208ENST00000410011 DENND6BQ8NEG7 585 aa16.09■□□□□ 0.17
LIMS2-208ENST00000410011 MCFD2Q8NI22 146 aa16.09■□□□□ 0.17
LIMS2-208ENST00000410011 SH3KBP1Q96B97 665 aa16.09■□□□□ 0.17
LIMS2-208ENST00000410011 TIFAQ96CG3 184 aa16.09■□□□□ 0.17
LIMS2-208ENST00000410011 TPD52L3Q96J77 140 aa16.09■□□□□ 0.17
LIMS2-208ENST00000410011 HERC2P3Q9BVR0 1158 aa16.09■□□□□ 0.17
LIMS2-208ENST00000410011 ABCG8Q9H221 673 aa16.09■□□□□ 0.17
LIMS2-208ENST00000410011 DCSTAMPQ9H295 470 aa16.09■□□□□ 0.17
LIMS2-208ENST00000410011 B4GALT6Q9UBX8 382 aa16.09■□□□□ 0.17
LIMS2-208ENST00000410011 VPS4AQ9UN37 437 aa16.09■□□□□ 0.17
LIMS2-208ENST00000410011 SH3BP1Q9Y3L3 701 aa16.09■□□□□ 0.17
LIMS2-208ENST00000410011 M0R082 166 aa16.08■□□□□ 0.17
LIMS2-208ENST00000410011 GCM2O75603 506 aaPredicted RBP16.08■□□□□ 0.17
LIMS2-208ENST00000410011 CDK1P06493 297 aa16.08■□□□□ 0.17
LIMS2-208ENST00000410011 RRM2P31350 389 aa16.08■□□□□ 0.17
LIMS2-208ENST00000410011 SEMG2Q02383 582 aa16.08■□□□□ 0.17
LIMS2-208ENST00000410011 RBBP4Q09028 425 aa16.08■□□□□ 0.17
LIMS2-208ENST00000410011 USP43Q70EL4 1123 aa16.08■□□□□ 0.17
LIMS2-208ENST00000410011 RNF175Q8N4F7 328 aa16.08■□□□□ 0.17
LIMS2-208ENST00000410011 ZNF513Q8N8E2 541 aaPredicted RBP16.08■□□□□ 0.17
LIMS2-208ENST00000410011 ELMO1Q92556 727 aa16.08■□□□□ 0.17
LIMS2-208ENST00000410011 RPL3LQ92901 407 aaKnown RBP16.08■□□□□ 0.17
LIMS2-208ENST00000410011 MYOCQ99972 504 aa16.08■□□□□ 0.17
LIMS2-208ENST00000410011 RUBCNLQ9H714 662 aa16.08■□□□□ 0.17
LIMS2-208ENST00000410011 PCDH12Q9NPG4 1184 aa16.08■□□□□ 0.17
LIMS2-208ENST00000410011 NDUFAF4Q9P032 175 aa16.08■□□□□ 0.17
LIMS2-208ENST00000410011 NFKBIL1Q9UBC1 381 aaPredicted RBP16.08■□□□□ 0.17
LIMS2-208ENST00000410011 SPASTQ9UBP0 616 aa16.08■□□□□ 0.17
LIMS2-208ENST00000410011 METTL15A6NJ78 407 aa16.08■□□□□ 0.16
LIMS2-208ENST00000410011 LIPAP38571 399 aa16.08■□□□□ 0.16
LIMS2-208ENST00000410011 CTSOP43234 321 aaPredicted RBP16.08■□□□□ 0.16
LIMS2-208ENST00000410011 LIMK1P53667 647 aa16.08■□□□□ 0.16
LIMS2-208ENST00000410011 PNLIPRP1P54315 467 aa16.08■□□□□ 0.16
LIMS2-208ENST00000410011 EIF4HQ15056 248 aaKnown RBP16.08■□□□□ 0.16
LIMS2-208ENST00000410011 ZNF181Q2M3W8 571 aa16.08■□□□□ 0.16
LIMS2-208ENST00000410011 INAVAQ3KP66 663 aa16.08■□□□□ 0.16
LIMS2-208ENST00000410011 C10orf62Q5T681 223 aaPredicted RBP16.08■□□□□ 0.16
LIMS2-208ENST00000410011 SERPINA13PQ6UXR4 307 aa16.08■□□□□ 0.16
LIMS2-208ENST00000410011 DEPDC4Q8N2C3 294 aa16.08■□□□□ 0.16
LIMS2-208ENST00000410011 OR4C15Q8NGM1 316 aa16.08■□□□□ 0.16
LIMS2-208ENST00000410011 MTERF1Q99551 399 aaKnown RBP16.08■□□□□ 0.16
LIMS2-208ENST00000410011 BHLHE41Q9C0J9 482 aaPredicted RBP16.08■□□□□ 0.16
LIMS2-208ENST00000410011 CFAP97Q9P2B7 532 aa16.08■□□□□ 0.16
LIMS2-208ENST00000410011 ATP6V1HQ9UI12 483 aa16.08■□□□□ 0.16
LIMS2-208ENST00000410011 POFUT2Q9Y2G5 429 aa16.08■□□□□ 0.16
LIMS2-208ENST00000410011 PCDHGA4Q9Y5G9 962 aa16.08■□□□□ 0.16
LIMS2-208ENST00000410011 WASH3PC4AMC7 463 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 TNFRSF11BO00300 401 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 AIREO43918 545 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 UPK1BO75841 260 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 ANXA4P09525 319 aaPredicted RBP16.07■□□□□ 0.16
LIMS2-208ENST00000410011 NUDT7P0C024 238 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 CTSKP43235 329 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 CLK1P49759 484 aaKnown RBP16.07■□□□□ 0.16
LIMS2-208ENST00000410011 STK19P49842 368 aaPredicted RBP16.07■□□□□ 0.16
LIMS2-208ENST00000410011 PPIGQ13427 754 aaKnown RBP eCLIP16.07■□□□□ 0.16
LIMS2-208ENST00000410011 TOR1AIP1Q5JTV8 583 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 AGTRAPQ6RW13 159 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 CCDC80Q76M96 950 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 SLC46A3Q7Z3Q1 461 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 OR56A3Q8NH54 315 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 FEVQ99581 238 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 THSD1Q9NS62 852 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 RAD18Q9NS91 495 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 ANKMY1Q9P2S6 941 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 OBSL1O75147 1896 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 ARHGEF33A8MVX0 844 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 E7EQ34 232 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 GRM6O15303 877 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 SRPRAP08240 638 aaKnown RBP16.07■□□□□ 0.16
LIMS2-208ENST00000410011 GABRB1P18505 474 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 EIF2B2P49770 351 aaKnown RBP16.07■□□□□ 0.16
LIMS2-208ENST00000410011 MVDP53602 400 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 BRAT1Q6PJG6 821 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 DPY19L3Q6ZPD9 716 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 ARMC8Q8IUR7 673 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 NAGSQ8N159 534 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 MRPS31Q92665 395 aaKnown RBP16.07■□□□□ 0.16
LIMS2-208ENST00000410011 GGHQ92820 318 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 BBS2Q9BXC9 721 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 FAM83DQ9H4H8 585 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 SGK2Q9HBY8 427 aa16.07■□□□□ 0.16
LIMS2-208ENST00000410011 SCHIP1Q9P0W5 487 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms