RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 TPT1P8Q9HAU6 139 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 ATP6V1HQ9UI12 483 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 GMEB1Q9Y692 573 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 CFAP20Q9Y6A4 193 aaKnown RBP19.34■□□□□ 0.69
USP39-204ENST00000409766 C1orf226A1L170 272 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 G3V2T6 193 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 SAP18O00422 153 aaKnown RBP19.34■□□□□ 0.69
USP39-204ENST00000409766 CLIC3O95833 236 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 PAK4O96013 591 aaPredicted RBP19.34■□□□□ 0.69
USP39-204ENST00000409766 IST1P53990 364 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 SEC13P55735 322 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 RAB30Q15771 203 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 VMACQ2NL98 169 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 TMIGD1Q6UXZ0 262 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 PTOV1Q86YD1 416 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 EID3Q8N140 333 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 TP53I13Q8NBR0 393 aaPredicted RBP19.34■□□□□ 0.69
USP39-204ENST00000409766 NRTNQ99748 197 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 MENTQ9BUN1 341 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 S1PR5Q9H228 398 aa19.34■□□□□ 0.69
USP39-204ENST00000409766 H0YAE9 185 aa19.33■□□□□ 0.68
USP39-204ENST00000409766 KLHL18O94889 574 aa19.33■□□□□ 0.68
USP39-204ENST00000409766 GBAP04062 536 aa19.33■□□□□ 0.68
USP39-204ENST00000409766 RPN2P04844 631 aa19.33■□□□□ 0.68
USP39-204ENST00000409766 PEX19P40855 299 aa19.33■□□□□ 0.68
USP39-204ENST00000409766 ZNF776Q68DI1 518 aaPredicted RBP19.33■□□□□ 0.68
USP39-204ENST00000409766 KIAA1211LQ6NV74 962 aa19.33■□□□□ 0.68
USP39-204ENST00000409766 ERICH5Q6P6B1 374 aa19.33■□□□□ 0.68
USP39-204ENST00000409766 VN1R5Q7Z5H4 357 aa19.33■□□□□ 0.68
USP39-204ENST00000409766 PATL1Q86TB9 770 aaKnown RBP19.33■□□□□ 0.68
USP39-204ENST00000409766 METTL4Q8N3J2 472 aa19.33■□□□□ 0.68
USP39-204ENST00000409766 ZCCHC7Q8N3Z6 543 aaKnown RBP19.33■□□□□ 0.68
USP39-204ENST00000409766 WDR48Q8TAF3 677 aa19.33■□□□□ 0.68
USP39-204ENST00000409766 SNX19Q92543 992 aa19.33■□□□□ 0.68
USP39-204ENST00000409766 REEP4Q9H6H4 257 aa19.33■□□□□ 0.68
USP39-204ENST00000409766 SOX17Q9H6I2 414 aaPredicted RBP19.33■□□□□ 0.68
USP39-204ENST00000409766 SH3BP4Q9P0V3 963 aa19.33■□□□□ 0.68
USP39-204ENST00000409766 CLEC1BQ9P126 229 aa19.33■□□□□ 0.68
USP39-204ENST00000409766 SAMD4AQ9UPU9 718 aaKnown RBP19.33■□□□□ 0.68
USP39-204ENST00000409766 TICRRQ7Z2Z1 1910 aa19.33■□□□□ 0.68
USP39-204ENST00000409766 KLHL33A6NCF5 533 aa19.32■□□□□ 0.68
USP39-204ENST00000409766 RNASET2O00584 256 aaKnown RBP19.32■□□□□ 0.68
USP39-204ENST00000409766 HPRP00739 348 aa19.32■□□□□ 0.68
USP39-204ENST00000409766 FUCA1P04066 466 aa19.32■□□□□ 0.68
USP39-204ENST00000409766 RPL10P27635 214 aaKnown RBP19.32■□□□□ 0.68
USP39-204ENST00000409766 CYP2A13Q16696 494 aa19.32■□□□□ 0.68
USP39-204ENST00000409766 KCTD21Q4G0X4 260 aa19.32■□□□□ 0.68
USP39-204ENST00000409766 ZNF385BQ569K4 471 aa19.32■□□□□ 0.68
USP39-204ENST00000409766 TTC33Q6PID6 262 aaPredicted RBP19.32■□□□□ 0.68
USP39-204ENST00000409766 CLEC4FQ8N1N0 589 aa19.32■□□□□ 0.68
USP39-204ENST00000409766 SVOPLQ8N434 492 aa19.32■□□□□ 0.68
USP39-204ENST00000409766 DGCR14Q96DF8 476 aaKnown RBP19.32■□□□□ 0.68
USP39-204ENST00000409766 ACAT2Q9BWD1 397 aa19.32■□□□□ 0.68
USP39-204ENST00000409766 BHLHE41Q9C0J9 482 aaPredicted RBP19.32■□□□□ 0.68
USP39-204ENST00000409766 MKRN2Q9H000 416 aaKnown RBP19.32■□□□□ 0.68
USP39-204ENST00000409766 FESP07332 822 aa19.32■□□□□ 0.68
USP39-204ENST00000409766 HSD17B2P37059 387 aa19.32■□□□□ 0.68
USP39-204ENST00000409766 MAGEA2P43356 314 aa19.32■□□□□ 0.68
USP39-204ENST00000409766 PHEXP78562 749 aa19.32■□□□□ 0.68
USP39-204ENST00000409766 LRRC74AQ0VAA2 488 aa19.32■□□□□ 0.68
USP39-204ENST00000409766 ADHFE1Q8IWW8 467 aa19.32■□□□□ 0.68
USP39-204ENST00000409766 OR10Q1Q8NGQ4 319 aa19.32■□□□□ 0.68
USP39-204ENST00000409766 PNPT1Q8TCS8 783 aaKnown RBP19.32■□□□□ 0.68
USP39-204ENST00000409766 NCSTNQ92542 709 aa19.32■□□□□ 0.68
USP39-204ENST00000409766 KLK6Q92876 244 aa19.32■□□□□ 0.68
USP39-204ENST00000409766 C1QTNF2Q9BXJ5 285 aa19.32■□□□□ 0.68
USP39-204ENST00000409766 CHST8Q9H2A9 424 aa19.32■□□□□ 0.68
USP39-204ENST00000409766 TRIM64A6NGJ6 449 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 GNGT2O14610 69 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 ALBP02768 609 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 FURINP09958 794 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 SLC35G4P0C7Q5 338 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 PTX3P26022 381 aaPredicted RBP19.31■□□□□ 0.68
USP39-204ENST00000409766 GSTT1P30711 240 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 CLCNKAP51800 687 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 RPS21P63220 83 aaKnown RBP19.31■□□□□ 0.68
USP39-204ENST00000409766 TUBA4AP68366 448 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 VAC14Q08AM6 782 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 DMPKQ09013 629 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 ADAM15Q13444 863 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 GAB1Q13480 694 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 PDE7AQ13946 482 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 MYBPC3Q14896 1274 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 C16orf72Q14CZ0 275 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 IER5LQ5T953 404 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 OFCC1Q8IZS5 231 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 KRT78Q8N1N4 520 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 ZNF786Q8N393 782 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 ZFP90Q8TF47 636 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 C16orf78Q8WTQ4 265 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 FAM131CQ96AQ9 280 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 SDCCAG3Q96C92 435 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 DPH2Q9BQC3 489 aaPredicted RBP19.31■□□□□ 0.68
USP39-204ENST00000409766 OSBPL10Q9BXB5 764 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 RBM38Q9H0Z9 239 aaKnown RBP19.31■□□□□ 0.68
USP39-204ENST00000409766 TRIT1Q9H3H1 467 aaKnown RBP19.31■□□□□ 0.68
USP39-204ENST00000409766 MYNNQ9NPC7 610 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 PHPT1Q9NRX4 125 aaPredicted RBP19.31■□□□□ 0.68
USP39-204ENST00000409766 FBXL12Q9NXK8 326 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 TAC3Q9UHF0 121 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms