RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 SLC22A7Q9Y694 548 aa13.94□□□□□ -0.18
CBX3-203ENST00000409747 CNTRLQ7Z7A1 2325 aa13.94□□□□□ -0.18
CBX3-203ENST00000409747 FEZF1A0PJY2 475 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 BANF1O75531 89 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 CLDN1O95832 211 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 CELA2AP08217 269 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 NPPBP16860 134 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 PHKG1Q16816 387 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 MSS51Q4VC12 460 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 TEDDM1Q5T9Z0 273 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 HECTD2Q5U5R9 776 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 PLAG1Q6DJT9 500 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 PRSS41Q7RTY9 318 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 SLC26A11Q86WA9 606 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 PIAS4Q8N2W9 510 aaPredicted RBP13.93□□□□□ -0.18
CBX3-203ENST00000409747 ABHD11Q8NFV4 315 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 OR1F2PQ96R84 312 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 SARGQ9BW04 601 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 SH2B3Q9UQQ2 575 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 A0A1B0GUH1 482 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 OR5H15A6NDH6 313 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 SGK494L7N484 410 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 LRRTM2O43300 516 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 JRKO75564 520 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 SEC24DO94855 1032 aaPredicted RBP13.93□□□□□ -0.18
CBX3-203ENST00000409747 TSPAN12O95859 305 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 WDPCPO95876 746 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 CRYABP02511 175 aaKnown RBP13.93□□□□□ -0.18
CBX3-203ENST00000409747 DR1Q01658 176 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 ZNF33BQ06732 778 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 EXT1Q16394 746 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 BTBD16Q32M84 506 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 KCT2Q8NC54 265 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 OR56A3Q8NH54 315 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 NR4A3Q92570 626 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 CFAP36Q96G28 342 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 SNF8Q96H20 258 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 MACROD1Q9BQ69 325 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 TRMT1Q9NXH9 659 aaKnown RBP13.93□□□□□ -0.18
CBX3-203ENST00000409747 ABI3Q9P2A4 366 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 CHMP2BQ9UQN3 213 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 VWA7Q9Y334 891 aa13.93□□□□□ -0.18
CBX3-203ENST00000409747 POLEQ07864 2286 aa13.92□□□□□ -0.18
CBX3-203ENST00000409747 TRBC2A0A5B9 178 aa13.92□□□□□ -0.18
CBX3-203ENST00000409747 NDUFS4O43181 175 aa13.92□□□□□ -0.18
CBX3-203ENST00000409747 RDH16O75452 317 aa13.92□□□□□ -0.18
CBX3-203ENST00000409747 STSP08842 583 aa13.92□□□□□ -0.18
CBX3-203ENST00000409747 ELK3P41970 407 aa13.92□□□□□ -0.18
CBX3-203ENST00000409747 EFNA3P52797 238 aa13.92□□□□□ -0.18
CBX3-203ENST00000409747 ARL4CP56559 192 aa13.92□□□□□ -0.18
CBX3-203ENST00000409747 PWP1Q13610 501 aa13.92□□□□□ -0.18
CBX3-203ENST00000409747 FRG1Q14331 258 aaKnown RBP13.92□□□□□ -0.18
CBX3-203ENST00000409747 ZNF324BQ6AW86 544 aaPredicted RBP13.92□□□□□ -0.18
CBX3-203ENST00000409747 LANCL3Q6ZV70 420 aa13.92□□□□□ -0.18
CBX3-203ENST00000409747 STRA8Q7Z7C7 330 aa13.92□□□□□ -0.18
CBX3-203ENST00000409747 IGDCC3Q8IVU1 814 aa13.92□□□□□ -0.18
CBX3-203ENST00000409747 OR4K1Q8NGD4 311 aa13.92□□□□□ -0.18
CBX3-203ENST00000409747 DNAJB8Q8NHS0 232 aa13.92□□□□□ -0.18
CBX3-203ENST00000409747 FBXL8Q96CD0 374 aa13.92□□□□□ -0.18
CBX3-203ENST00000409747 PDLIM5Q96HC4 596 aaKnown RBP13.92□□□□□ -0.18
CBX3-203ENST00000409747 ZNF354BQ96LW1 612 aa13.92□□□□□ -0.18
CBX3-203ENST00000409747 STMN3Q9NZ72 180 aa13.92□□□□□ -0.18
CBX3-203ENST00000409747 ZFATQ9P243 1243 aa13.92□□□□□ -0.18
CBX3-203ENST00000409747 NAALAD2Q9Y3Q0 740 aa13.92□□□□□ -0.18
CBX3-203ENST00000409747 NDC80O14777 642 aa13.91□□□□□ -0.18
CBX3-203ENST00000409747 OR1F1O43749 312 aa13.91□□□□□ -0.18
CBX3-203ENST00000409747 LCMT2O60294 686 aaKnown RBP13.91□□□□□ -0.18
CBX3-203ENST00000409747 PRAMEF2O60811 474 aa13.91□□□□□ -0.18
CBX3-203ENST00000409747 RASAL1O95294 804 aa13.91□□□□□ -0.18
CBX3-203ENST00000409747 IVDP26440 423 aa13.91□□□□□ -0.18
CBX3-203ENST00000409747 SNRPNP63162 240 aaKnown RBP13.91□□□□□ -0.18
CBX3-203ENST00000409747 RGS1Q08116 209 aa13.91□□□□□ -0.18
CBX3-203ENST00000409747 STEAP4Q687X5 459 aa13.91□□□□□ -0.18
CBX3-203ENST00000409747 ABHD13Q7L211 337 aa13.91□□□□□ -0.18
CBX3-203ENST00000409747 ANKRD37Q7Z713 158 aa13.91□□□□□ -0.18
CBX3-203ENST00000409747 PDSS2Q86YH6 399 aa13.91□□□□□ -0.18
CBX3-203ENST00000409747 PYCR2Q96C36 320 aa13.91□□□□□ -0.18
CBX3-203ENST00000409747 SLC17A6Q9P2U8 582 aa13.91□□□□□ -0.18
CBX3-203ENST00000409747 TEX264Q9Y6I9 313 aa13.91□□□□□ -0.18
CBX3-203ENST00000409747 CRYBG3Q68DQ2 2970 aa13.91□□□□□ -0.18
CBX3-203ENST00000409747 F10P00742 488 aa13.9□□□□□ -0.18
CBX3-203ENST00000409747 JAK1P23458 1154 aa13.9□□□□□ -0.18
CBX3-203ENST00000409747 DCTP40126 519 aa13.9□□□□□ -0.18
CBX3-203ENST00000409747 TDGF1P3P51864 188 aa13.9□□□□□ -0.18
CBX3-203ENST00000409747 ILF2Q12905 390 aaKnown RBP13.9□□□□□ -0.18
CBX3-203ENST00000409747 CSHL1Q14406 222 aa13.9□□□□□ -0.18
CBX3-203ENST00000409747 NSDHLQ15738 373 aa13.9□□□□□ -0.18
CBX3-203ENST00000409747 KLHL7Q8IXQ5 586 aa13.9□□□□□ -0.18
CBX3-203ENST00000409747 AFAP1L2Q8N4X5 818 aa13.9□□□□□ -0.18
CBX3-203ENST00000409747 M1APQ8TC57 530 aa13.9□□□□□ -0.18
CBX3-203ENST00000409747 SLC5A11Q8WWX8 675 aa13.9□□□□□ -0.18
CBX3-203ENST00000409747 ANKRD7Q92527 254 aa13.9□□□□□ -0.18
CBX3-203ENST00000409747 TAAR6Q96RI8 345 aa13.9□□□□□ -0.18
CBX3-203ENST00000409747 LPAR4Q99677 370 aa13.9□□□□□ -0.18
CBX3-203ENST00000409747 GRPEL1Q9HAV7 217 aa13.9□□□□□ -0.18
CBX3-203ENST00000409747 KCNK13Q9HB14 408 aa13.9□□□□□ -0.18
CBX3-203ENST00000409747 ZFP69BQ9UJL9 534 aa13.9□□□□□ -0.18
CBX3-203ENST00000409747 DYRK1BQ9Y463 629 aa13.9□□□□□ -0.18
CBX3-203ENST00000409747 CELSR2Q9HCU4 2923 aa13.9□□□□□ -0.18
CBX3-203ENST00000409747 IGHV3-20A0A0C4DH32 117 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms