RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 HJURPQ8NCD3 748 aaPredicted RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 VPS37AQ8NEZ2 397 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 ZNF420Q8TAQ5 688 aaPredicted RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 ZNF675Q8TD23 568 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 FRG2BQ96QU4 278 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 RIOK2Q9BVS4 552 aaKnown RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 RHBGQ9H310 441 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 MRGBPQ9NV56 204 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 THG1LQ9NWX6 298 aaKnown RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 PTBP2Q9UKA9 531 aaKnown RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 SARDHQ9UL12 918 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 SAMD4AQ9UPU9 718 aaKnown RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 MYO15AQ9UKN7 3530 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 FAM25AB3EWG3 89 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 FAM25CB3EWG5 89 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 FAM25GB3EWG6 89 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 GNB5O14775 395 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 AREL1O15033 823 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 SMAD9O15198 467 aaKnown RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 TSPAN6O43657 245 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 PRKRAO75569 313 aaKnown RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 C9P02748 559 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 CLEC2LP0C7M8 214 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 PABPC1P11940 636 aaKnown RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 SLC26A3P40879 764 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 ATP4BP51164 291 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 OR2B6P58173 313 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 ILF2Q12905 390 aaKnown RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 GPRC6AQ5T6X5 926 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 SMARCD3Q6STE5 483 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 TMIGD1Q6UXZ0 262 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 PLEKHG7Q6ZR37 379 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 SLC16A12Q6ZSM3 486 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 DNAJB7Q7Z6W7 309 aaPredicted RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 ABI3BPQ7Z7G0 1075 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 AMER2Q8N7J2 671 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 TERB1Q8NA31 727 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 BCL7CQ8WUZ0 217 aaPredicted RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 SLC35A5Q9BS91 424 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 MAF1Q9H063 256 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 ARNT2Q9HBZ2 717 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 DNAJC11Q9NVH1 559 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 NKIRAS2Q9NYR9 191 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 KIAA1522Q9P206 1035 aaPredicted RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 CLEC2DQ9UHP7 191 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 RTTNQ86VV8 2226 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 SBF1O95248 1867 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 FEZF1A0PJY2 475 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 KDELR3O43731 214 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 NCR1O76036 304 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 SEC14L2O76054 403 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 IGSF6O95976 241 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 IGLV3-25P01717 112 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 URODP06132 367 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 ACRP10323 421 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 CYP2A7P20853 494 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 TAS2R50P59544 299 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 RPS7P62081 194 aaKnown RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 TLE2Q04725 743 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 MTA1Q13330 715 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 UGT8Q16880 541 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 VMACQ2NL98 169 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 SNAP47Q5SQN1 464 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 LDLRAD1Q5T700 205 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 CPZQ66K79 652 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 CXorf57Q6NSI4 855 aaKnown RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 ZNF551Q7Z340 670 aaPredicted RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 ZSWIM9Q86XI8 627 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 RBM45Q8IUH3 476 aaKnown RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 TCEANCQ8N8B7 351 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 PIGKQ92643 395 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 DIRAS2Q96HU8 199 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 FAM129BQ96TA1 746 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 YME1L1Q96TA2 773 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 C2orf49Q9BVC5 232 aaPredicted RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 QRSL1Q9H0R6 528 aaKnown RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 ACOT13Q9NPJ3 140 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 DCAF13Q9NV06 445 aaKnown RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 PAQR5Q9NXK6 330 aaPredicted RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 TUBA8Q9NY65 449 aaPredicted RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 LSM7Q9UK45 103 aaKnown RBP8.04□□□□□ -1.12
SNX13-201ENST00000409076 TMEM98Q9Y2Y6 226 aa8.04□□□□□ -1.12
SNX13-201ENST00000409076 STX16O14662 325 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 AOC2O75106 756 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 ETHE1O95571 254 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 ZFP36L2P47974 494 aaKnown RBP8.03□□□□□ -1.12
SNX13-201ENST00000409076 MAPKAPK2P49137 400 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 DEFA1P59665 94 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 DEFA3P59666 94 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 MAD2L1Q13257 205 aaPredicted RBP8.03□□□□□ -1.12
SNX13-201ENST00000409076 DOC2AQ14183 400 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 MBTPS1Q14703 1052 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 CTF1Q16619 201 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 BCL7AQ4VC05 210 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 XKR4Q5GH76 650 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 ZNF691Q5VV52 312 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 KIAA1614Q5VZ46 1190 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 TMEM220Q6QAJ8 160 aa8.03□□□□□ -1.12
SNX13-201ENST00000409076 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.03□□□□□ -1.12
SNX13-201ENST00000409076 RRM2BQ7LG56 351 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms