RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 RUVBL1Q9Y265 456 aaKnown RBP27.99■■■□□ 2.07
USP42-202ENST00000404008 WDR91A4D1P6 747 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 H0YIV9 168 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 TXNDC9O14530 226 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 STK17BO94768 372 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 KIAA0754O94854 1291 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 GSTM2P28161 218 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 TBC1D25Q3MII6 688 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 ADNP2Q6IQ32 1131 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 ZCCHC23Q6ZST2 131 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 SYVN1Q86TM6 617 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 TTC29Q8NA56 475 aaPredicted RBP27.99■■■□□ 2.07
USP42-202ENST00000404008 CAMKVQ8NCB2 501 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 TRPV3Q8NET8 790 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 OR6Y1Q8NGX8 325 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 MGARPQ8TDB4 240 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 SLC13A3Q8WWT9 602 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 SEC16BQ96JE7 1060 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 MAGEB10Q96LZ2 347 aaPredicted RBP27.99■■■□□ 2.07
USP42-202ENST00000404008 MACROD1Q9BQ69 325 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 ACTR5Q9H9F9 607 aaPredicted RBP27.99■■■□□ 2.07
USP42-202ENST00000404008 TMEM184BQ9Y519 407 aaPredicted RBP27.99■■■□□ 2.07
USP42-202ENST00000404008 UBFD1O14562 309 aaKnown RBP27.98■■■□□ 2.07
USP42-202ENST00000404008 NDUFS4O43181 175 aa27.98■■■□□ 2.07
USP42-202ENST00000404008 CPNE3O75131 537 aaKnown RBP27.98■■■□□ 2.07
USP42-202ENST00000404008 NTRK1P04629 796 aa27.98■■■□□ 2.07
USP42-202ENST00000404008 SLC35G6P0C7Q6 338 aa27.98■■■□□ 2.07
USP42-202ENST00000404008 CD82P27701 267 aa27.98■■■□□ 2.07
USP42-202ENST00000404008 CCR10P46092 362 aa27.98■■■□□ 2.07
USP42-202ENST00000404008 PKNOX1P55347 436 aa27.98■■■□□ 2.07
USP42-202ENST00000404008 CYP4F2P78329 520 aa27.98■■■□□ 2.07
USP42-202ENST00000404008 PWP1Q13610 501 aa27.98■■■□□ 2.07
USP42-202ENST00000404008 CPSF6Q16630 551 aaKnown RBP eCLIP27.98■■■□□ 2.07
USP42-202ENST00000404008 GPRIN3Q6ZVF9 776 aa27.98■■■□□ 2.07
USP42-202ENST00000404008 VN1R5Q7Z5H4 357 aa27.98■■■□□ 2.07
USP42-202ENST00000404008 ARHGEF39Q8N4T4 335 aa27.98■■■□□ 2.07
USP42-202ENST00000404008 SLC38A9Q8NBW4 561 aa27.98■■■□□ 2.07
USP42-202ENST00000404008 OR7G3Q8NG95 312 aa27.98■■■□□ 2.07
USP42-202ENST00000404008 CREB3L4Q8TEY5 395 aa27.98■■■□□ 2.07
USP42-202ENST00000404008 AGAP11Q8TF27 550 aa27.98■■■□□ 2.07
USP42-202ENST00000404008 CNDP1Q96KN2 507 aa27.98■■■□□ 2.07
USP42-202ENST00000404008 PAIP2Q9BPZ3 127 aaKnown RBP27.98■■■□□ 2.07
USP42-202ENST00000404008 NDC1Q9BTX1 674 aa27.98■■■□□ 2.07
USP42-202ENST00000404008 NLNQ9BYT8 704 aa27.98■■■□□ 2.07
USP42-202ENST00000404008 DRC3Q9H069 523 aa27.98■■■□□ 2.07
USP42-202ENST00000404008 TRPS1Q9UHF7 1281 aa27.98■■■□□ 2.07
USP42-202ENST00000404008 SRPK3Q9UPE1 567 aa27.98■■■□□ 2.07
USP42-202ENST00000404008 PCDHGA11Q9Y5H2 935 aa27.98■■■□□ 2.07
USP42-202ENST00000404008 HYKKA2RU49 373 aa27.97■■■□□ 2.07
USP42-202ENST00000404008 NPHS1O60500 1241 aa27.97■■■□□ 2.07
USP42-202ENST00000404008 DLGAP3O95886 979 aa27.97■■■□□ 2.07
USP42-202ENST00000404008 EMP3P54852 163 aa27.97■■■□□ 2.07
USP42-202ENST00000404008 MANEAQ5SRI9 462 aa27.97■■■□□ 2.07
USP42-202ENST00000404008 YOD1Q5VVQ6 348 aaPredicted RBP27.97■■■□□ 2.07
USP42-202ENST00000404008 MDM1Q8TC05 714 aa27.97■■■□□ 2.07
USP42-202ENST00000404008 NT5CQ8TCD5 201 aa27.97■■■□□ 2.07
USP42-202ENST00000404008 TRMOQ9BU70 441 aa27.97■■■□□ 2.07
USP42-202ENST00000404008 TSC22D4Q9Y3Q8 395 aa27.97■■■□□ 2.07
USP42-202ENST00000404008 ANKDD1BA6NHY2 528 aa27.96■■■□□ 2.07
USP42-202ENST00000404008 OR4F21O95013 312 aa27.96■■■□□ 2.07
USP42-202ENST00000404008 ESRRBO95718 433 aa27.96■■■□□ 2.07
USP42-202ENST00000404008 SERPIND1P05546 499 aa27.96■■■□□ 2.07
USP42-202ENST00000404008 HBQ1P09105 142 aa27.96■■■□□ 2.07
USP42-202ENST00000404008 ARSFP54793 590 aa27.96■■■□□ 2.07
USP42-202ENST00000404008 ZRSR2Q15696 482 aaKnown RBP27.96■■■□□ 2.07
USP42-202ENST00000404008 RHBDD2Q6NTF9 364 aa27.96■■■□□ 2.07
USP42-202ENST00000404008 REPS1Q96D71 796 aa27.96■■■□□ 2.07
USP42-202ENST00000404008 CLIP3Q96DZ5 547 aa27.96■■■□□ 2.07
USP42-202ENST00000404008 C10orf90Q96M02 699 aa27.96■■■□□ 2.07
USP42-202ENST00000404008 SLC7A5P2Q9GIP4 190 aa27.96■■■□□ 2.07
USP42-202ENST00000404008 MID1IP1Q9NPA3 183 aa27.96■■■□□ 2.07
USP42-202ENST00000404008 CUTCQ9NTM9 273 aa27.96■■■□□ 2.07
USP42-202ENST00000404008 DKK4Q9UBT3 224 aa27.96■■■□□ 2.07
USP42-202ENST00000404008 IQCJ-SCHIP1C9J366 451 aaPredicted RBP27.95■■■□□ 2.06
USP42-202ENST00000404008 CLEC3AO75596 197 aa27.95■■■□□ 2.06
USP42-202ENST00000404008 MED26O95402 600 aa27.95■■■□□ 2.06
USP42-202ENST00000404008 PCNAP12004 261 aa27.95■■■□□ 2.06
USP42-202ENST00000404008 SERPINB1P30740 379 aa27.95■■■□□ 2.06
USP42-202ENST00000404008 PPP2R2AP63151 447 aa27.95■■■□□ 2.06
USP42-202ENST00000404008 RCN2Q14257 317 aa27.95■■■□□ 2.06
USP42-202ENST00000404008 CHI3L2Q15782 390 aa27.95■■■□□ 2.06
USP42-202ENST00000404008 FAM214AQ32MH5 1076 aa27.95■■■□□ 2.06
USP42-202ENST00000404008 GARNL3Q5VVW2 1013 aa27.95■■■□□ 2.06
USP42-202ENST00000404008 ZFAND4Q86XD8 727 aa27.95■■■□□ 2.06
USP42-202ENST00000404008 KCT2Q8NC54 265 aa27.95■■■□□ 2.06
USP42-202ENST00000404008 WDR20Q8TBZ3 569 aa27.95■■■□□ 2.06
USP42-202ENST00000404008 MED4Q9NPJ6 270 aa27.95■■■□□ 2.06
USP42-202ENST00000404008 FER1L5A0AVI2 2057 aa27.95■■■□□ 2.06
USP42-202ENST00000404008 STMND1H3BQB6 276 aa27.94■■■□□ 2.06
USP42-202ENST00000404008 H3BQF6 201 aa27.94■■■□□ 2.06
USP42-202ENST00000404008 TBX6O95947 436 aaPredicted RBP27.94■■■□□ 2.06
USP42-202ENST00000404008 SERPINA6P08185 405 aa27.94■■■□□ 2.06
USP42-202ENST00000404008 RORAP35398 523 aa27.94■■■□□ 2.06
USP42-202ENST00000404008 SERPINB5P36952 375 aa27.94■■■□□ 2.06
USP42-202ENST00000404008 RGS1Q08116 209 aa27.94■■■□□ 2.06
USP42-202ENST00000404008 HYAL2Q12891 473 aa27.94■■■□□ 2.06
USP42-202ENST00000404008 COL9A2Q14055 689 aaPredicted RBP27.94■■■□□ 2.06
USP42-202ENST00000404008 CES4AQ5XG92 561 aa27.94■■■□□ 2.06
USP42-202ENST00000404008 TMEM214Q6NUQ4 689 aaKnown RBP27.94■■■□□ 2.06
USP42-202ENST00000404008 CDYL2Q8N8U2 506 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms