RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ZNF501Q96CX3 271 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 C10orf90Q96M02 699 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 UHRF2Q96PU4 802 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 RASL10BQ96S79 203 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 FSD1Q9BTV5 496 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 DPEP2Q9H4A9 486 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 PDRG1Q9NUG6 133 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 DNAJC11Q9NVH1 559 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 SPG21Q9NZD8 308 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 FLRT3Q9NZU0 649 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 FETUBQ9UGM5 382 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 POMT2Q9UKY4 750 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 ITM2BQ9Y287 266 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 A0A087X0K7 114 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 C13orf42A0A1B0GVH6 325 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 MSGN1A6NI15 193 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 RTN2O75298 545 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 CDK2AP2O75956 126 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 HMBSP08397 361 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 RBMS1P29558 406 aaKnown RBP3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 CHRNB4P30926 498 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 CASP3P42574 277 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 UCP2P55851 309 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 KIAA1024LP59773 190 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 MYL7Q01449 175 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 NPRL3Q12980 569 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 TRIM29Q14134 588 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 AARDQ4LEZ3 155 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 LRRC38Q5VT99 294 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 DHRS11Q6UWP2 260 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 GPR141Q7Z602 305 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 PRUNE1Q86TP1 453 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 DCUN1D3Q8IWE4 304 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 PEX5LQ8IYB4 626 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 TCEANCQ8N8B7 351 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 NEK11Q8NG66 645 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 LGALS12Q96DT0 336 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 GIMAP5Q96F15 307 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 C2orf48Q96LS8 159 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 PGLYRP2Q96PD5 576 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 PRAM1Q96QH2 718 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 CDCA3Q99618 268 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 PRMT1Q99873 361 aaKnown RBP3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 IDI2Q9BXS1 227 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 C10orf88Q9H8K7 445 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 AGTPBP1Q9UPW5 1226 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 KCNK6Q9Y257 313 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 ABCC9O60706 1549 aa3.44□□□□□ -1.86
HMGB1P17-201ENST00000403495 A0A087WUV0 522 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 A0A087WYN8 130 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 CCDC162PA2VCL2 907 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 A8MVM7 634 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 NPIPA3F8WFD2 350 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 BLOC1S5-TXNDC5H3BN57 136 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 O00370 1275 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 SEC24AO95486 1093 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 OLFM2O95897 454 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 MT-ND2P03891 347 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 THEGLP0DJG4 465 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 SLC2A2P11168 524 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 CEACAM1P13688 526 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 IER3P46695 156 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 KHKP50053 298 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 NR0B1P51843 470 aaKnown RBP3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 XGP55808 180 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 HERV-K104P61576 105 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 KCNJ10P78508 379 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 GFPT1Q06210 699 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 CETN1Q12798 172 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 CBX3Q13185 183 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 RPS6KA1Q15418 735 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 LCE1AQ5T7P2 110 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 KCTD11Q693B1 232 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 BHLHB9Q6PI77 547 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 SLC25A47Q6Q0C1 308 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 C17orf107Q6ZR85 190 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 USP43Q70EL4 1123 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 COX8CQ7Z4L0 72 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 SIAH3Q8IW03 269 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 APLFQ8IW19 511 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 CCDC60Q8IWA6 550 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 CHCHD4Q8N4Q1 142 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 DCLK2Q8N568 766 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 TRIM58Q8NG06 486 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 SMAP2Q8WU79 429 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 CKAP2Q8WWK9 683 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 LPAR4Q99677 370 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 C17orf62Q9BQA9 187 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 TRIM7Q9C029 511 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 UBQLN3Q9H347 655 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 THAP9Q9H5L6 903 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 AKIRIN1Q9H9L7 192 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 RPF1Q9H9Y2 349 aaKnown RBP3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 PNPLA3Q9NST1 481 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 MAN2C1Q9NTJ4 1040 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 TBC1D13Q9NVG8 400 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 HACD3Q9P035 362 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 SLC12A6Q9UHW9 1150 aa3.43□□□□□ -1.86
HMGB1P17-201ENST00000403495 PSORS1C1Q9UIG5 152 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms