RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 NUDT11Q96G61 164 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 C4orf36Q96KX1 117 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 KREMEN1Q96MU8 473 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 CCNL2Q96S94 520 aaPredicted RBP3.78□□□□□ -1.8
CLHC1-201ENST00000401408 ALG12Q9BV10 488 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 SPATA5L1Q9BVQ7 753 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 HINT2Q9BX68 163 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 SGPP1Q9BX95 441 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 IDI2Q9BXS1 227 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 ANKRD60Q9BZ19 345 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 SLC6A17Q9H1V8 727 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 LHX5Q9H2C1 402 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 SNX25Q9H3E2 840 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 SMOC2Q9H3U7 446 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 VAT1LQ9HCJ6 419 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 ZNF302Q9NR11 478 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 BATF3Q9NR55 127 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 YAE1D1Q9NRH1 226 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 TMLHEQ9NVH6 421 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 SLCO1C1Q9NYB5 712 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 KCMF1Q9P0J7 381 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 SEMA5BQ9P283 1151 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 ATXN10Q9UBB4 475 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 ZNHIT2Q9UHR6 403 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 DRG1Q9Y295 367 aaKnown RBP3.78□□□□□ -1.8
CLHC1-201ENST00000401408 AAR2Q9Y312 384 aaKnown RBP3.78□□□□□ -1.8
CLHC1-201ENST00000401408 RBMX2Q9Y388 322 aaKnown RBP3.78□□□□□ -1.8
CLHC1-201ENST00000401408 WDFY3Q8IZQ1 3526 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 SPTBN2O15020 2390 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 HELZ2Q9BYK8 2649 aaKnown RBP3.78□□□□□ -1.8
CLHC1-201ENST00000401408 A0A087WWL8 130 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 A0A0A6YYH2 397 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 A0A1B0GUH1 482 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 A0A1W2PQ67 120 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 PLSCR5A0PG75 271 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 RAB19A4D1S5 217 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 C5orf52A6NGY3 159 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 A6NJ64 397 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 A8MUI8 341 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 GRXCR1A8MXD5 290 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 MAGEB2O15479 319 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 PLRG1O43660 514 aaKnown RBP3.78□□□□□ -1.8
CLHC1-201ENST00000401408 PSIP1O75475 530 aaKnown RBP3.78□□□□□ -1.8
CLHC1-201ENST00000401408 DFFBO76075 338 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 KRT6AP02538 564 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 MT-ND2P03891 347 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 FCER2P06734 321 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 HOXC6P09630 235 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 GNAZP19086 355 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 PAICSP22234 425 aaKnown RBP3.78□□□□□ -1.8
CLHC1-201ENST00000401408 GLDCP23378 1020 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 PON1P27169 355 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 CSF2RBP32927 897 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 PNPLA4P41247 253 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 NAMPTP43490 491 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 SLC6A9P48067 706 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 CLK3P49761 638 aaKnown RBP3.78□□□□□ -1.8
CLHC1-201ENST00000401408 CEBPGP53567 150 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 CSNK1G2P78368 415 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 KRT76Q01546 638 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 HSF2Q03933 536 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 RBPJQ06330 500 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 LSAMPQ13449 338 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 SLC18A3Q16572 532 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 TTC38Q5R3I4 469 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.78□□□□□ -1.8
CLHC1-201ENST00000401408 ATF7IP2Q5U623 682 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 PRAMEF13Q5VWM6 474 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 RCSD1Q6JBY9 416 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 KIAA1841Q6NSI8 718 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 PODNL1Q6PEZ8 512 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 GLDNQ6ZMI3 551 aaPredicted RBP3.78□□□□□ -1.8
CLHC1-201ENST00000401408 TMEM26Q6ZUK4 368 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 GDF7Q7Z4P5 450 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 GPR180Q86V85 440 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 RBM45Q8IUH3 476 aaKnown RBP3.78□□□□□ -1.8
CLHC1-201ENST00000401408 LRRC56Q8IYG6 542 aaPredicted RBP3.78□□□□□ -1.8
CLHC1-201ENST00000401408 SIRT6Q8N6T7 355 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 GPR161Q8N6U8 529 aaKnown RBP3.78□□□□□ -1.8
CLHC1-201ENST00000401408 RNF148Q8N7C7 305 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 SCAIQ8N9R8 606 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 PRSS33Q8NF86 280 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 ZNF397Q8NF99 534 aaPredicted RBP3.78□□□□□ -1.8
CLHC1-201ENST00000401408 OR10H4Q8NGA5 316 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 GRHL3Q8TE85 626 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 FAM151AQ8WW52 585 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 HTR3CQ8WXA8 447 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 SOCS4Q8WXH5 440 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 FCGR1BQ92637 280 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 MMABQ96EY8 250 aaPredicted RBP3.78□□□□□ -1.8
CLHC1-201ENST00000401408 BBS4Q96RK4 519 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 GPR20Q99678 358 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 SLC6A16Q9GZN6 736 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 NUAK2Q9H093 628 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 ATG10Q9H0Y0 220 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 FZD8Q9H461 694 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 GOLPH3Q9H4A6 298 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 COG4Q9H9E3 785 aa3.78□□□□□ -1.8
CLHC1-201ENST00000401408 BARX1Q9HBU1 254 aaPredicted RBP3.78□□□□□ -1.8
CLHC1-201ENST00000401408 ZNF160Q9HCG1 818 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms