RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 OR1E2P47887 323 aa16.51■□□□□ 0.23
PTPRA-205ENST00000399903 CCL23P55773 120 aa16.51■□□□□ 0.23
PTPRA-205ENST00000399903 TAF10Q12962 218 aa16.51■□□□□ 0.23
PTPRA-205ENST00000399903 MRPL28Q13084 256 aaKnown RBP16.51■□□□□ 0.23
PTPRA-205ENST00000399903 USP39Q53GS9 565 aaKnown RBP16.51■□□□□ 0.23
PTPRA-205ENST00000399903 NKAPQ8N5F7 415 aaKnown RBP16.51■□□□□ 0.23
PTPRA-205ENST00000399903 RTL3Q8N8U3 475 aaKnown RBP16.51■□□□□ 0.23
PTPRA-205ENST00000399903 NACC2Q96BF6 587 aa16.51■□□□□ 0.23
PTPRA-205ENST00000399903 COL21A1Q96P44 957 aa16.51■□□□□ 0.23
PTPRA-205ENST00000399903 ZNF382Q96SR6 550 aa16.51■□□□□ 0.23
PTPRA-205ENST00000399903 CCSER2Q9H7U1 834 aa16.51■□□□□ 0.23
PTPRA-205ENST00000399903 ZNF236Q9UL36 1845 aa16.51■□□□□ 0.23
PTPRA-205ENST00000399903 STX7O15400 261 aaKnown RBP16.5■□□□□ 0.23
PTPRA-205ENST00000399903 RPS3P23396 243 aaKnown RBP eCLIP16.5■□□□□ 0.23
PTPRA-205ENST00000399903 MAGEA11P43364 429 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 NRIP1P48552 1158 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 SETMARQ53H47 684 aaPredicted RBP16.5■□□□□ 0.23
PTPRA-205ENST00000399903 TOR2AQ5JU69 321 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 PSAPL1Q6NUJ1 521 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 GLT6D1Q7Z4J2 308 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 PIANPQ8IYJ0 282 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 IGSF8Q969P0 613 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 FBXO32Q969P5 355 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 MCCC1Q96RQ3 725 aaPredicted RBP16.5■□□□□ 0.23
PTPRA-205ENST00000399903 SPON2Q9BUD6 331 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 TRIM45Q9H8W5 580 aaPredicted RBP16.5■□□□□ 0.23
PTPRA-205ENST00000399903 WWOXQ9NZC7 414 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 HSPE1-MOB4S4R3N1 261 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 B8ZZF3 427 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 GPX5O75715 221 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 MMP2P08253 660 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 VEPH1Q14D04 833 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 TCTN1Q2MV58 587 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 EIF3MQ7L2H7 374 aaKnown RBP16.5■□□□□ 0.23
PTPRA-205ENST00000399903 CCDC117Q8IWD4 279 aaPredicted RBP16.5■□□□□ 0.23
PTPRA-205ENST00000399903 RGL4Q8IZJ4 473 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 TRMT61AQ96FX7 289 aaKnown RBP16.5■□□□□ 0.23
PTPRA-205ENST00000399903 FAM83DQ9H4H8 585 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 MAGIXQ9H6Y5 334 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 RLIMQ9NVW2 624 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 MED16Q9Y2X0 877 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 TSC2P49815 1807 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 A0A1W2PQ45 241 aaPredicted RBP16.5■□□□□ 0.23
PTPRA-205ENST00000399903 A0A1W2PQY0 241 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 STX16O14662 325 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 FGF10O15520 208 aaPredicted RBP16.5■□□□□ 0.23
PTPRA-205ENST00000399903 PKMP14618 531 aaKnown RBP16.5■□□□□ 0.23
PTPRA-205ENST00000399903 INPP1P49441 399 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 TBX4P57082 545 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 GLRX5Q86SX6 157 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 SLC34A3Q8N130 599 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 B3GNT7Q8NFL0 401 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 ANGPTL6Q8NI99 470 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 MAL2Q969L2 176 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 PPP1R2P1Q96PQ5 205 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 PANX1Q96RD7 426 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 EBPLQ9BY08 206 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 ZNF224Q9NZL3 707 aa16.5■□□□□ 0.23
PTPRA-205ENST00000399903 CIB4A0PJX0 185 aa16.49■□□□□ 0.23
PTPRA-205ENST00000399903 IL6P05231 212 aa16.49■□□□□ 0.23
PTPRA-205ENST00000399903 ATXN1LP0C7T5 689 aaKnown RBP16.49■□□□□ 0.23
PTPRA-205ENST00000399903 CD72P21854 359 aa16.49■□□□□ 0.23
PTPRA-205ENST00000399903 KCNQ1P51787 676 aa16.49■□□□□ 0.23
PTPRA-205ENST00000399903 TATDN3Q17R31 274 aa16.49■□□□□ 0.23
PTPRA-205ENST00000399903 DEFB128Q7Z7B8 93 aa16.49■□□□□ 0.23
PTPRA-205ENST00000399903 C7orf57Q8NEG2 295 aa16.49■□□□□ 0.23
PTPRA-205ENST00000399903 RNF121Q9H920 327 aa16.49■□□□□ 0.23
PTPRA-205ENST00000399903 PCDHGB2Q9Y5G2 931 aa16.49■□□□□ 0.23
PTPRA-205ENST00000399903 B4DXG7 233 aa16.49■□□□□ 0.23
PTPRA-205ENST00000399903 OR7A17O14581 309 aa16.49■□□□□ 0.23
PTPRA-205ENST00000399903 ADAM12O43184 909 aa16.49■□□□□ 0.23
PTPRA-205ENST00000399903 PQBP1O60828 265 aaKnown RBP16.49■□□□□ 0.23
PTPRA-205ENST00000399903 OR7A10O76100 309 aa16.49■□□□□ 0.23
PTPRA-205ENST00000399903 EPN2O95208 641 aa16.49■□□□□ 0.23
PTPRA-205ENST00000399903 RTP2Q5QGT7 225 aa16.49■□□□□ 0.23
PTPRA-205ENST00000399903 ZSWIM9Q86XI8 627 aa16.49■□□□□ 0.23
PTPRA-205ENST00000399903 GON7Q9BXV9 100 aa16.49■□□□□ 0.23
PTPRA-205ENST00000399903 ARNT2Q9HBZ2 717 aa16.49■□□□□ 0.23
PTPRA-205ENST00000399903 NLKQ9UBE8 527 aa16.49■□□□□ 0.23
PTPRA-205ENST00000399903 FKBPLQ9UIM3 349 aa16.49■□□□□ 0.23
PTPRA-205ENST00000399903 PCDHB8Q9UN66 801 aa16.49■□□□□ 0.23
PTPRA-205ENST00000399903 DLGAP4Q9Y2H0 992 aa16.49■□□□□ 0.23
PTPRA-205ENST00000399903 CCNDBP1O95273 360 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 INHAP05111 366 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 BCKDHAP12694 445 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 TACR1P25103 407 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 PKLRP30613 574 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 ACVRL1P37023 503 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 CDH12P55289 794 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 SPDYE7PQ495Y7 208 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.48■□□□□ 0.23
PTPRA-205ENST00000399903 MBOAT1Q6ZNC8 495 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 SLC5A8Q8N695 610 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 RPRD1AQ96P16 312 aaPredicted RBP16.48■□□□□ 0.23
PTPRA-205ENST00000399903 SLC23A1Q9UHI7 598 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 PSIP1O75475 530 aaKnown RBP16.48■□□□□ 0.23
PTPRA-205ENST00000399903 CDRT1O95170 752 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 OTCP00480 354 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 IGLV3-25P01717 112 aa16.48■□□□□ 0.23
PTPRA-205ENST00000399903 ENGP17813 658 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms