RNA–Protein interactions for RNA: ENST00000399621.5

CACNA1C-212, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-212ENST00000399621 PRRT2Q7Z6L0 340 aaPredicted RBP10.75□□□□□ -0.69
CACNA1C-212ENST00000399621 LRRTM4Q86VH4 590 aa10.75□□□□□ -0.69
CACNA1C-212ENST00000399621 SLC44A3Q8N4M1 653 aa10.75□□□□□ -0.69
CACNA1C-212ENST00000399621 TMEM175Q9BSA9 504 aa10.75□□□□□ -0.69
CACNA1C-212ENST00000399621 RBCK1Q9BYM8 510 aa10.75□□□□□ -0.69
CACNA1C-212ENST00000399621 DEFB126Q9BYW3 111 aa10.75□□□□□ -0.69
CACNA1C-212ENST00000399621 SLCO1B3Q9NPD5 702 aa10.75□□□□□ -0.69
CACNA1C-212ENST00000399621 MALT1Q9UDY8 824 aa10.75□□□□□ -0.69
CACNA1C-212ENST00000399621 H3BNX3 289 aa10.75□□□□□ -0.69
CACNA1C-212ENST00000399621 PCBP2Q15366 365 aaKnown RBP eCLIP10.75□□□□□ -0.69
CACNA1C-212ENST00000399621 FAM69BQ5VUD6 431 aa10.75□□□□□ -0.69
CACNA1C-212ENST00000399621 KIAA0895LQ68EN5 471 aa10.75□□□□□ -0.69
CACNA1C-212ENST00000399621 ZNF101Q8IZC7 436 aa10.75□□□□□ -0.69
CACNA1C-212ENST00000399621 HDAC2Q92769 488 aaKnown RBP10.75□□□□□ -0.69
CACNA1C-212ENST00000399621 DNAJC19Q96DA6 116 aa10.75□□□□□ -0.69
CACNA1C-212ENST00000399621 ECHDC3Q96DC8 303 aa10.75□□□□□ -0.69
CACNA1C-212ENST00000399621 SNTG1Q9NSN8 517 aa10.75□□□□□ -0.69
CACNA1C-212ENST00000399621 PDE10AQ9Y233 779 aa10.75□□□□□ -0.69
CACNA1C-212ENST00000399621 SQORQ9Y6N5 450 aa10.75□□□□□ -0.69
CACNA1C-212ENST00000399621 DPPA5A6NC42 116 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 SEC14L5O43304 696 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 CER1O95813 267 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 PTGS2P35354 604 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 EPHA4P54764 986 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 SF3B4Q15427 424 aaKnown RBP eCLIP10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 FAM189A2Q15884 450 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 FBXO48Q5FWF7 155 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 ABHD15Q6UXT9 468 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 LRRC20Q8TCA0 184 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 C7orf26Q96N11 449 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 HHIPQ96QV1 700 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 DPEP3Q9H4B8 488 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 C3P01024 1663 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 A0A1W2PRB8 838 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 ZNF99A8MXY4 864 aaPredicted RBP10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 TP53I11O14683 189 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 ITGB1P05556 798 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 POLR2CP19387 275 aaPredicted RBP10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 GATMP50440 423 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 RPL26P61254 145 aaKnown RBP10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 STK11Q15831 433 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 IQCCQ4KMZ1 466 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 KIAA1211LQ6NV74 962 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 TNFAIP8L2Q6P589 184 aaPredicted RBP10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 DPY19L4Q7Z388 723 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 EGFL6Q8IUX8 553 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 TCEANCQ8N8B7 351 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 GLB1L3Q8NCI6 653 aaPredicted RBP10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 SUN5Q8TC36 379 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 BRI3BPQ8WY22 251 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 PDCD1LG2Q9BQ51 273 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 ORAI3Q9BRQ5 295 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 ANKRA2Q9H9E1 313 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 TREM1Q9NP99 234 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 ZNF180Q9UJW8 692 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 RCCD1A6NED2 376 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 PLD2O14939 933 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 EFNA1P20827 205 aaPredicted RBP10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 DCDC1P59894 354 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 CARD17Q5XLA6 110 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 KIAA1161Q6NSJ0 714 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 LRRC55Q6ZSA7 311 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 SNIP1Q8TAD8 396 aaKnown RBP10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 TMCO6Q96DC7 493 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 SNX27Q96L92 541 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 CPXM1Q96SM3 734 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 ZNF700Q9H0M5 742 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 SSU72Q9NP77 194 aaKnown RBP10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 GRHL1Q9NZI5 618 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 REV1Q9UBZ9 1251 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 GABRQQ9UN88 632 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 PCDHGA10Q9Y5H3 936 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 ROBO3Q96MS0 1386 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 FAM170BA6NMN3 283 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 NOBOXO60393 691 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 FARS2O95363 451 aaKnown RBP10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 TYRP14679 529 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 ADAM17P78536 824 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 RFTN1Q14699 578 aaPredicted RBP10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 ESCO2Q56NI9 601 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 GRHL2Q6ISB3 625 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 SLC36A4Q6YBV0 504 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 TAC4Q86UU9 113 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 NUDT13Q86X67 352 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 IRF2BP1Q8IU81 584 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 CPNE9Q8IYJ1 553 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 OR2L2Q8NH16 312 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 TM9SF4Q92544 642 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 DMRTB1Q96MA1 342 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 YIPF4Q9BSR8 244 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 ACTR10Q9NZ32 417 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 COMMD3Q9UBI1 195 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 ABCD2Q9UBJ2 740 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 RARRES3Q9UL19 164 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 FAM208AQ9UK61 1670 aaKnown RBP10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 HCKP08631 526 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 HK1P19367 917 aa10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 PXNP49023 591 aaPredicted RBP10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 MAD2L1BPQ15013 274 aaPredicted RBP10.74□□□□□ -0.69
CACNA1C-212ENST00000399621 GPR68Q15743 365 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms