RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 ANKRD23Q86SG2 305 aa13.59□□□□□ -0.23
COL4A3-202ENST00000396578 ALPK1Q96QP1 1244 aa13.59□□□□□ -0.23
COL4A3-202ENST00000396578 MEGF6O75095 1541 aa13.59□□□□□ -0.23
COL4A3-202ENST00000396578 SYN3O14994 580 aa13.58□□□□□ -0.23
COL4A3-202ENST00000396578 PROM1O43490 865 aa13.58□□□□□ -0.23
COL4A3-202ENST00000396578 NRIP1P48552 1158 aa13.58□□□□□ -0.23
COL4A3-202ENST00000396578 UAP1L1Q3KQV9 507 aa13.58□□□□□ -0.23
COL4A3-202ENST00000396578 FRG2Q64ET8 278 aa13.58□□□□□ -0.23
COL4A3-202ENST00000396578 LRRC66Q68CR7 880 aa13.58□□□□□ -0.23
COL4A3-202ENST00000396578 ABHD15Q6UXT9 468 aa13.58□□□□□ -0.23
COL4A3-202ENST00000396578 NCCRP1Q6ZVX7 275 aaPredicted RBP13.58□□□□□ -0.23
COL4A3-202ENST00000396578 TMEM139Q8IV31 216 aa13.58□□□□□ -0.23
COL4A3-202ENST00000396578 OR4C15Q8NGM1 316 aa13.58□□□□□ -0.23
COL4A3-202ENST00000396578 FRG2BQ96QU4 278 aa13.58□□□□□ -0.23
COL4A3-202ENST00000396578 OR5B12Q96R08 314 aa13.58□□□□□ -0.23
COL4A3-202ENST00000396578 EIF1AYO14602 144 aaKnown RBP13.58□□□□□ -0.24
COL4A3-202ENST00000396578 CBSLP0DN79 551 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 ITGB5P18084 799 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 AOC1P19801 751 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 CBSP35520 551 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 MLLT3P42568 568 aaPredicted RBP13.58□□□□□ -0.24
COL4A3-202ENST00000396578 ST3GAL4Q11206 333 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 IL31RAQ8NI17 732 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 ITFG2Q969R8 447 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 NUS1Q96E22 293 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 SDHAF3Q9NRP4 125 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 STXBP5LQ9Y2K9 1186 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 SMIM28A0A1B0GU29 152 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 ECI2O75521 394 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 MTFR2Q6P444 385 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 SLC15A3Q8IY34 581 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 RPF2Q9H7B2 306 aaKnown RBP13.58□□□□□ -0.24
COL4A3-202ENST00000396578 TLE6Q9H808 572 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 RABL2AQ9UBK7 228 aaPredicted RBP13.58□□□□□ -0.24
COL4A3-202ENST00000396578 NKX1-2Q9UD57 310 aaPredicted RBP13.58□□□□□ -0.24
COL4A3-202ENST00000396578 RABL2BQ9UNT1 228 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 EXOSC1Q9Y3B2 195 aaKnown RBP13.58□□□□□ -0.24
COL4A3-202ENST00000396578 AGLP35573 1532 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 CREG1O75629 220 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 SFTPBP07988 381 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 WASP42768 502 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 RPS3AP61247 264 aaKnown RBP13.58□□□□□ -0.24
COL4A3-202ENST00000396578 TMEM198Q66K66 360 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 P4HA3Q7Z4N8 544 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 NIPA2Q8N8Q9 360 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 CASTOR1Q8WTX7 329 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 RELTQ969Z4 430 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 TMEM41AQ96HV5 264 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.58□□□□□ -0.24
COL4A3-202ENST00000396578 VSTM5A8MXK1 200 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 CDC7O00311 574 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 LAG3P18627 525 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 CAV3P56539 151 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 ODF4Q2M2E3 257 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 MAP1SQ66K74 1059 aaPredicted RBP13.58□□□□□ -0.24
COL4A3-202ENST00000396578 HERVK_113Q902F9 699 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 CMTM7Q96FZ5 175 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 KLHL15Q96M94 604 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 TMEM185BQ9H7F4 350 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 FLRT2O43155 660 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 LRRC37A5PQ49AS3 106 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 TATDN1Q6P1N9 297 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 MAELQ96JY0 434 aaKnown RBP13.58□□□□□ -0.24
COL4A3-202ENST00000396578 MYNNQ9NPC7 610 aa13.58□□□□□ -0.24
COL4A3-202ENST00000396578 FAM170BA6NMN3 283 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 HOXD8P13378 290 aaPredicted RBP13.57□□□□□ -0.24
COL4A3-202ENST00000396578 MAGEA11P43364 429 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 EIF1AXP47813 144 aaKnown RBP13.57□□□□□ -0.24
COL4A3-202ENST00000396578 SLC24A5Q71RS6 500 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 ZSCAN4Q8NAM6 433 aaPredicted RBP13.57□□□□□ -0.24
COL4A3-202ENST00000396578 FANK1Q8TC84 345 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 A0A1B0GVT2 93 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 BTBD19C9JJ37 291 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 H3BSH0 61 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 CCND3P30281 292 aaPredicted RBP13.57□□□□□ -0.24
COL4A3-202ENST00000396578 FXYD6P3P58550 94 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 LRRC32Q14392 662 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 PRAMEF14Q5SWL7 426 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 PRAMEF13Q5VWM6 474 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 VITQ6UXI7 678 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 GID4Q8IVV7 300 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 IL12RB2Q99665 862 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 CENPBD1B2RD01 187 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 CAPZA1P52907 286 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 SLC18A1P54219 525 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 SEC13P55735 322 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 ATXN7L3Q14CW9 347 aaPredicted RBP13.57□□□□□ -0.24
COL4A3-202ENST00000396578 TMEM126BQ8IUX1 230 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 PDZD7Q9H5P4 517 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 A0A1B0GVI7 797 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 A0A1W2PP18 115 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 GTF2F2P13984 249 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 ZNF572Q7Z3I7 529 aaPredicted RBP13.57□□□□□ -0.24
COL4A3-202ENST00000396578 DTLQ9NZJ0 730 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 FZD1Q9UP38 647 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 ANKRD26Q9UPS8 1709 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 ABRAXAS2Q15018 415 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 PRSS58Q8IYP2 241 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 PCDH10Q9P2E7 1040 aa13.57□□□□□ -0.24
COL4A3-202ENST00000396578 ZDHHC2Q9UIJ5 367 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms