RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 SPNS1Q9H2V7 528 aa17.32■□□□□ 0.36
FXN-203ENST00000396366 EPS8L2Q9H6S3 715 aa17.32■□□□□ 0.36
FXN-203ENST00000396366 MOCS1Q9NZB8 636 aa17.32■□□□□ 0.36
FXN-203ENST00000396366 ZFATQ9P243 1243 aa17.32■□□□□ 0.36
FXN-203ENST00000396366 LOC102723996A0A087X1L8 192 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 A0A1W2PQ72 361 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 CTAGE15A4D2H0 777 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 H0YIG0 161 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 RDH16O75452 317 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 B3GALT4O96024 378 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 F10P00742 488 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 SERPINA7P05543 415 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 ITGAMP11215 1152 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 CCND1P24385 295 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 CDC16Q13042 620 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 FRG1Q14331 258 aaKnown RBP17.31■□□□□ 0.36
FXN-203ENST00000396366 ZNF169Q14929 603 aaPredicted RBP17.31■□□□□ 0.36
FXN-203ENST00000396366 MFSD4BQ5TF39 518 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 LANCL3Q6ZV70 420 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 CTAGE6Q86UF2 777 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 ZC3HC1Q86WB0 502 aaKnown RBP17.31■□□□□ 0.36
FXN-203ENST00000396366 CAMKVQ8NCB2 501 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 OR4K1Q8NGD4 311 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 SSC4DQ8WTU2 575 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 ANKRD49Q8WVL7 239 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 FBXL8Q96CD0 374 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 THAP11Q96EK4 314 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 CYTH2Q99418 400 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 ZNF700Q9H0M5 742 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 SMYD2Q9NRG4 433 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 CORO1CQ9ULV4 474 aaPredicted RBP17.31■□□□□ 0.36
FXN-203ENST00000396366 SCN2AQ99250 2005 aa17.31■□□□□ 0.36
FXN-203ENST00000396366 SPTBN1Q01082 2364 aaKnown RBP17.31■□□□□ 0.36
FXN-203ENST00000396366 FAM95CA0A1B0GW59 222 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 NPEPPSL1A6NEC2 478 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 ANKUB1A6NFN9 424 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 ZNF860A6NHJ4 632 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 E7ESA3 106 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 OR1F1O43749 312 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 C8orf89P0DMQ9 161 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 SOX11P35716 441 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 XCR1P46094 333 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 CCR8P51685 355 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 AP1S2P56377 157 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 TAS2R39P59534 338 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 PPP1R3AQ16821 1122 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 MINDY4Q4G0A6 757 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 CEP97Q8IW35 865 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 ZBED8Q8IZ13 594 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 C17orf53Q8N3J3 647 aaPredicted RBP17.3■□□□□ 0.36
FXN-203ENST00000396366 ABHD11Q8NFV4 315 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 OR5T3Q8NGG3 340 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 OR1N1Q8NGS0 311 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 NEIL2Q969S2 332 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 PDLIM5Q96HC4 596 aaKnown RBP17.3■□□□□ 0.36
FXN-203ENST00000396366 IMMP1LQ96LU5 166 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 TSNARE1Q96NA8 513 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 HAUS8Q9BT25 410 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 TRIM54Q9BYV2 358 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 DPH5Q9H2P9 285 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 ANKHQ9HCJ1 492 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 ERRFI1Q9UJM3 462 aaPredicted RBP17.3■□□□□ 0.36
FXN-203ENST00000396366 NAALAD2Q9Y3Q0 740 aa17.3■□□□□ 0.36
FXN-203ENST00000396366 SEC24DO94855 1032 aaPredicted RBP17.29■□□□□ 0.36
FXN-203ENST00000396366 ZNF37AP17032 561 aaPredicted RBP17.29■□□□□ 0.36
FXN-203ENST00000396366 GRK3P35626 688 aa17.29■□□□□ 0.36
FXN-203ENST00000396366 TSFMP43897 325 aaKnown RBP17.29■□□□□ 0.36
FXN-203ENST00000396366 TLR1Q15399 786 aa17.29■□□□□ 0.36
FXN-203ENST00000396366 C18orf21Q32NC0 220 aaPredicted RBP17.29■□□□□ 0.36
FXN-203ENST00000396366 GRHL3Q8TE85 626 aa17.29■□□□□ 0.36
FXN-203ENST00000396366 ANP32BQ92688 251 aaKnown RBP17.29■□□□□ 0.36
FXN-203ENST00000396366 RBCK1Q9BYM8 510 aa17.29■□□□□ 0.36
FXN-203ENST00000396366 UNKQ9C0B0 810 aaKnown RBP17.29■□□□□ 0.36
FXN-203ENST00000396366 RIC8BQ9NVN3 520 aa17.29■□□□□ 0.36
FXN-203ENST00000396366 PABPN1LA6NDY0 278 aaKnown RBP17.28■□□□□ 0.36
FXN-203ENST00000396366 CXorf49A8MYA2 514 aaPredicted RBP17.28■□□□□ 0.36
FXN-203ENST00000396366 NDUFS4O43181 175 aa17.28■□□□□ 0.36
FXN-203ENST00000396366 WFS1O76024 890 aa17.28■□□□□ 0.36
FXN-203ENST00000396366 SERPIND1P05546 499 aa17.28■□□□□ 0.36
FXN-203ENST00000396366 ENO2P09104 434 aaPredicted RBP17.28■□□□□ 0.36
FXN-203ENST00000396366 SSTR1P30872 391 aa17.28■□□□□ 0.36
FXN-203ENST00000396366 OLR1P78380 273 aa17.28■□□□□ 0.36
FXN-203ENST00000396366 ARG2P78540 354 aa17.28■□□□□ 0.36
FXN-203ENST00000396366 THOC6Q86W42 341 aaKnown RBP17.28■□□□□ 0.36
FXN-203ENST00000396366 SPATA6LQ8N4H0 392 aa17.28■□□□□ 0.36
FXN-203ENST00000396366 SLC5A11Q8WWX8 675 aa17.28■□□□□ 0.36
FXN-203ENST00000396366 METTL21AQ8WXB1 218 aa17.28■□□□□ 0.36
FXN-203ENST00000396366 PEX11GQ96HA9 241 aa17.28■□□□□ 0.36
FXN-203ENST00000396366 MCMBPQ9BTE3 642 aa17.28■□□□□ 0.36
FXN-203ENST00000396366 AGPAT4Q9NRZ5 378 aa17.28■□□□□ 0.36
FXN-203ENST00000396366 RNF14Q9UBS8 474 aa17.28■□□□□ 0.36
FXN-203ENST00000396366 SLC22A14Q9Y267 594 aa17.28■□□□□ 0.36
FXN-203ENST00000396366 MTO1Q9Y2Z2 717 aaKnown RBP17.28■□□□□ 0.36
FXN-203ENST00000396366 SLC22A7Q9Y694 548 aa17.28■□□□□ 0.36
FXN-203ENST00000396366 CPAMD8Q8IZJ3 1885 aa17.27■□□□□ 0.36
FXN-203ENST00000396366 TRBC2A0A5B9 178 aa17.27■□□□□ 0.36
FXN-203ENST00000396366 A1L4Q6 167 aa17.27■□□□□ 0.36
FXN-203ENST00000396366 RAD51CO43502 376 aa17.27■□□□□ 0.36
FXN-203ENST00000396366 CDC123O75794 336 aaPredicted RBP17.27■□□□□ 0.36
FXN-203ENST00000396366 SLC35G6P0C7Q6 338 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms