RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 SERPIND1P05546 499 aa20.35■□□□□ 0.85
FXN-202ENST00000396364 PCNAP12004 261 aa20.35■□□□□ 0.85
FXN-202ENST00000396364 SPINK2P20155 84 aa20.35■□□□□ 0.85
FXN-202ENST00000396364 NR1D1P20393 614 aa20.35■□□□□ 0.85
FXN-202ENST00000396364 HMOX2P30519 316 aa20.35■□□□□ 0.85
FXN-202ENST00000396364 TRAF3Q13114 568 aa20.35■□□□□ 0.85
FXN-202ENST00000396364 RCN2Q14257 317 aa20.35■□□□□ 0.85
FXN-202ENST00000396364 CPSF6Q16630 551 aaKnown RBP eCLIP20.35■□□□□ 0.85
FXN-202ENST00000396364 MUM1Q2TAK8 710 aa20.35■□□□□ 0.85
FXN-202ENST00000396364 NIPAL1Q6NVV3 410 aa20.35■□□□□ 0.85
FXN-202ENST00000396364 LAS2Q8IYD9 372 aa20.35■□□□□ 0.85
FXN-202ENST00000396364 ZNF740Q8NDX6 193 aa20.35■□□□□ 0.85
FXN-202ENST00000396364 CCT6BQ92526 530 aa20.35■□□□□ 0.85
FXN-202ENST00000396364 CLIP3Q96DZ5 547 aa20.35■□□□□ 0.85
FXN-202ENST00000396364 PRR11Q96HE9 360 aaPredicted RBP20.35■□□□□ 0.85
FXN-202ENST00000396364 CENPKQ9BS16 269 aa20.35■□□□□ 0.85
FXN-202ENST00000396364 SLC29A3Q9BZD2 475 aa20.35■□□□□ 0.85
FXN-202ENST00000396364 RHBGQ9H310 441 aa20.35■□□□□ 0.85
FXN-202ENST00000396364 ELOVL6Q9H5J4 265 aa20.35■□□□□ 0.85
FXN-202ENST00000396364 ACTR5Q9H9F9 607 aaPredicted RBP20.35■□□□□ 0.85
FXN-202ENST00000396364 MLXIPLQ9NP71 852 aa20.35■□□□□ 0.85
FXN-202ENST00000396364 TSC22D4Q9Y3Q8 395 aa20.35■□□□□ 0.85
FXN-202ENST00000396364 B3GALT1Q9Y5Z6 326 aa20.35■□□□□ 0.85
FXN-202ENST00000396364 LOC105369274A0A096LPK9 316 aa20.34■□□□□ 0.85
FXN-202ENST00000396364 LOC102723532A0A0G2JNH3 316 aa20.34■□□□□ 0.85
FXN-202ENST00000396364 A0A1W2PNU3 283 aaPredicted RBP20.34■□□□□ 0.85
FXN-202ENST00000396364 HYKKA2RU49 373 aa20.34■□□□□ 0.85
FXN-202ENST00000396364 FITM1A5D6W6 292 aa20.34■□□□□ 0.85
FXN-202ENST00000396364 LCMT2O60294 686 aaKnown RBP20.34■□□□□ 0.85
FXN-202ENST00000396364 KRT6AP02538 564 aa20.34■□□□□ 0.85
FXN-202ENST00000396364 KRT6BP04259 564 aa20.34■□□□□ 0.85
FXN-202ENST00000396364 TSPAN8P19075 237 aa20.34■□□□□ 0.85
FXN-202ENST00000396364 KRT6CP48668 564 aa20.34■□□□□ 0.85
FXN-202ENST00000396364 STXBP1P61764 594 aaKnown RBP20.34■□□□□ 0.85
FXN-202ENST00000396364 TGM3Q08188 693 aa20.34■□□□□ 0.85
FXN-202ENST00000396364 CHI3L2Q15782 390 aa20.34■□□□□ 0.85
FXN-202ENST00000396364 ATG16L1Q676U5 607 aa20.34■□□□□ 0.85
FXN-202ENST00000396364 PWWP2BQ6NUJ5 590 aa20.34■□□□□ 0.85
FXN-202ENST00000396364 RPS27LQ71UM5 84 aaKnown RBP20.34■□□□□ 0.85
FXN-202ENST00000396364 OR4N4Q8N0Y3 316 aa20.34■□□□□ 0.85
FXN-202ENST00000396364 CDK15Q96Q40 435 aa20.34■□□□□ 0.85
FXN-202ENST00000396364 SPRTNQ9H040 489 aaPredicted RBP20.34■□□□□ 0.85
FXN-202ENST00000396364 SPNS1Q9H2V7 528 aa20.34■□□□□ 0.85
FXN-202ENST00000396364 RNF11Q9Y3C5 154 aa20.34■□□□□ 0.85
FXN-202ENST00000396364 CDRT15L2A8MXV6 281 aa20.33■□□□□ 0.85
FXN-202ENST00000396364 C9orf172C9J069 976 aa20.33■□□□□ 0.85
FXN-202ENST00000396364 ZNF749O43361 778 aa20.33■□□□□ 0.85
FXN-202ENST00000396364 BRINP1O60477 761 aa20.33■□□□□ 0.85
FXN-202ENST00000396364 PRAMEF4O60810 478 aa20.33■□□□□ 0.85
FXN-202ENST00000396364 OR4F21O95013 312 aa20.33■□□□□ 0.85
FXN-202ENST00000396364 CHEK2O96017 543 aa20.33■□□□□ 0.85
FXN-202ENST00000396364 KLK3P07288 261 aaPredicted RBP20.33■□□□□ 0.85
FXN-202ENST00000396364 SERPINA6P08185 405 aa20.33■□□□□ 0.85
FXN-202ENST00000396364 CD22P20273 847 aa20.33■□□□□ 0.85
FXN-202ENST00000396364 SLC5A2P31639 672 aa20.33■□□□□ 0.85
FXN-202ENST00000396364 PIK3CBP42338 1070 aa20.33■□□□□ 0.85
FXN-202ENST00000396364 ZNF33BQ06732 778 aa20.33■□□□□ 0.85
FXN-202ENST00000396364 ZRSR2Q15696 482 aaKnown RBP20.33■□□□□ 0.85
FXN-202ENST00000396364 PRAMEF9Q5VWM5 478 aa20.33■□□□□ 0.85
FXN-202ENST00000396364 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.33■□□□□ 0.85
FXN-202ENST00000396364 SRFBP1Q8NEF9 429 aaKnown RBP20.33■□□□□ 0.85
FXN-202ENST00000396364 OR7G3Q8NG95 312 aa20.33■□□□□ 0.85
FXN-202ENST00000396364 METTL6Q8TCB7 284 aa20.33■□□□□ 0.85
FXN-202ENST00000396364 NT5CQ8TCD5 201 aa20.33■□□□□ 0.85
FXN-202ENST00000396364 PROKR1Q8TCW9 393 aa20.33■□□□□ 0.85
FXN-202ENST00000396364 AGAP11Q8TF27 550 aa20.33■□□□□ 0.85
FXN-202ENST00000396364 TM4SF19Q96DZ7 209 aa20.33■□□□□ 0.85
FXN-202ENST00000396364 INTS9Q9NV88 658 aaKnown RBP20.33■□□□□ 0.85
FXN-202ENST00000396364 CDC14AQ9UNH5 594 aa20.33■□□□□ 0.85
FXN-202ENST00000396364 A0A088AWK7 358 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 STMND1H3BQB6 276 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 HCRTR1O43613 425 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 STK17BO94768 372 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 KIAA0754O94854 1291 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 HSPA4LO95757 839 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 CCNYL3P0C7X3 344 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 PIM1P11309 404 aaPredicted RBP20.32■□□□□ 0.84
FXN-202ENST00000396364 ZNF10P21506 573 aaPredicted RBP20.32■□□□□ 0.84
FXN-202ENST00000396364 AGXTP21549 392 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 WDR4P57081 412 aaKnown RBP20.32■□□□□ 0.84
FXN-202ENST00000396364 CYP4F2P78329 520 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 STX3Q13277 289 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 PRTGQ2VWP7 1150 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 FRG2Q64ET8 278 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 LETMD1Q6P1Q0 360 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 ZCCHC23Q6ZST2 131 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 CHSY3Q70JA7 882 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 ABHD13Q7L211 337 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 VN1R4Q7Z5H5 301 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 SYVN1Q86TM6 617 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 AFAP1L2Q8N4X5 818 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 CDYL2Q8N8U2 506 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 ANKRD53Q8N9V6 530 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 MVB12AQ96EY5 273 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 CMTM7Q96FZ5 175 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 LRFN5Q96NI6 719 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 FRG2BQ96QU4 278 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 C17orf62Q9BQA9 187 aa20.32■□□□□ 0.84
FXN-202ENST00000396364 DPH2Q9BQC3 489 aaPredicted RBP20.32■□□□□ 0.84
FXN-202ENST00000396364 ASCL3Q9NQ33 180 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms