RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 C12orf10Q9HB07 376 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 ANKHQ9HCJ1 492 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 DDX28Q9NUL7 540 aaKnown RBP5.18□□□□□ -1.58
VPS41-203ENST00000395969 SPATA6Q9NWH7 488 aaPredicted RBP5.18□□□□□ -1.58
VPS41-203ENST00000395969 PAK1IP1Q9NWT1 392 aaPredicted RBP5.18□□□□□ -1.58
VPS41-203ENST00000395969 ELOVL2Q9NXB9 296 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 SLCO3A1Q9UIG8 710 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 AURKCQ9UQB9 309 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 FCF1Q9Y324 198 aaKnown RBP5.18□□□□□ -1.58
VPS41-203ENST00000395969 HCN4Q9Y3Q4 1203 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 PCDHA9Q9Y5H5 950 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 MAU2Q9Y6X3 613 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 ZFC3H1O60293 1989 aaKnown RBP5.18□□□□□ -1.58
VPS41-203ENST00000395969 EVPLLA8MZ36 301 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 CDK2AP1O14519 115 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 ACRP10323 421 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 IFI30P13284 250 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 FSHRP23945 695 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 EEF1B2P24534 225 aaKnown RBP5.18□□□□□ -1.58
VPS41-203ENST00000395969 KIR2DL1P43626 348 aaPredicted RBP5.18□□□□□ -1.58
VPS41-203ENST00000395969 DGKGP49619 791 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 SLC13A2Q13183 592 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 DUSP7Q16829 419 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 PAGE2BQ5JRK9 111 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 CATSPEREQ5SY80 951 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 LRRC66Q68CR7 880 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 TBPL2Q6SJ96 375 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 DPY19L3Q6ZPD9 716 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 SPPL2CQ8IUH8 684 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 FUNDC1Q8IVP5 155 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 FBXO39Q8N4B4 442 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 BEND7Q8N7W2 519 aaPredicted RBP5.18□□□□□ -1.58
VPS41-203ENST00000395969 LSMEM1Q8N8F7 131 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.18□□□□□ -1.58
VPS41-203ENST00000395969 MAGEE2Q8TD90 523 aaPredicted RBP5.18□□□□□ -1.58
VPS41-203ENST00000395969 BLOC1S5Q8TDH9 187 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 SGCDQ92629 289 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 GPR21Q99679 349 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 ALOXE3Q9BYJ1 711 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 SLIRPQ9GZT3 109 aaKnown RBP5.18□□□□□ -1.58
VPS41-203ENST00000395969 TNFRSF12AQ9NP84 129 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 CCDC177Q9NQR7 707 aaPredicted RBP5.18□□□□□ -1.58
VPS41-203ENST00000395969 SLC2A4RGQ9NR83 387 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 BAG5Q9UL15 447 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 A0A1W2PP18 115 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 SYNDIG1LA6NDD5 238 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 C16orf96A6NNT2 1141 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 CCL16O15467 120 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 FFAR2O15552 330 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 TPST1O60507 370 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 SEMA3DO95025 777 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 CKMP06732 381 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 OR56A5P0C7T3 313 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 UMPSP11172 480 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 SPNP16150 400 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 LBPP18428 481 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 C5AR1P21730 350 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 IRS1P35568 1242 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 SERPINB10P48595 397 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 KIAA1024LP59773 190 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 CTAG1AP78358 180 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 MRPS15P82914 257 aaKnown RBP5.18□□□□□ -1.58
VPS41-203ENST00000395969 NPTX1Q15818 432 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 CHRNA6Q15825 494 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 AGKQ53H12 422 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 PIP5KL1Q5T9C9 394 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 KIAA1161Q6NSJ0 714 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 TUBA3EQ6PEY2 450 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 VITQ6UXI7 678 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 THAP5Q7Z6K1 395 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 TRIM69Q86WT6 500 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 CALHM3Q86XJ0 350 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 GPSM1Q86YR5 675 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 NETO2Q8NC67 525 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 IL17RDQ8NFM7 739 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 OR4K1Q8NGD4 311 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 NDNFQ8TB73 568 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 WDR20Q8TBZ3 569 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 YIPF6Q96EC8 236 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 PPP3R2Q96LZ3 170 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 ZNF300Q96RE9 604 aaPredicted RBP5.18□□□□□ -1.58
VPS41-203ENST00000395969 SLC30A3Q99726 388 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 RHBGQ9H310 441 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 DSN1Q9H410 356 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 SLC32A1Q9H598 525 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 PCDHGC4Q9Y5F7 938 aa5.18□□□□□ -1.58
VPS41-203ENST00000395969 LINC00854A0A1B0GVQ3 168 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 SAGE2PA6NJ88 616 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 TMEM233B4DJY2 109 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 CHURC1-FNTBB4DL54 471 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 FXYD1O00168 92 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 PLRG1O43660 514 aaKnown RBP5.17□□□□□ -1.58
VPS41-203ENST00000395969 NDUFS2O75306 463 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 SCO1O75880 301 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 RHOBTB1O94844 696 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 DKK1O94907 266 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 NADKO95544 446 aaPredicted RBP5.17□□□□□ -1.58
VPS41-203ENST00000395969 ALBP02768 609 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 HMBSP08397 361 aa5.17□□□□□ -1.58
VPS41-203ENST00000395969 ALDOCP09972 364 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms